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Merge Olga's changes #260

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Merge Olga's changes #260

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Commits on Jan 10, 2022

  1. Merge pull request #1 from aidenlab/encode 

    renaming of file
    @dudcha
    dudcha committed Jan 10, 2022
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Commits on Jan 18, 2022

  1. First path adding stats shortcuts

    @dudcha
    dudcha committed Jan 18, 2022
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  2. cleaning up stats calculation

    @dudcha
    dudcha committed Jan 18, 2022
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Commits on Jan 20, 2022

  1. add haploid accessibility to postprocessing

    @dudcha
    dudcha committed Jan 20, 2022
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  2. Last sync before breaking up

    @dudcha
    dudcha committed Jan 20, 2022
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  3. duplicate code to extract megafication

    @dudcha
    dudcha committed Jan 20, 2022
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  4. First path for megafy script

    @dudcha
    dudcha committed Jan 20, 2022
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  5. description tweak

    @dudcha
    dudcha committed Jan 20, 2022
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  6. rename option name for stats inferrence

    @dudcha
    dudcha committed Jan 20, 2022
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  7. cast mapq as int in bam to mnd

    @dudcha
    dudcha committed Jan 20, 2022
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Commits on Jan 21, 2022

  1. remove 1bp resolution from defaults

    @dudcha
    dudcha committed Jan 21, 2022
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Commits on Jan 23, 2022

  1. Merge pull request #2 from dudcha/encode-mega 

    Pull Olga's changes
    @sa501428
    sa501428 committed Jan 23, 2022
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  2. Merge branch 'main' into encode

    @sa501428
    sa501428 committed Jan 23, 2022
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