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adaptyvbio · Dec 26, 2023 · 887f8a4 · 887f8a4
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Showing 4 changed files with 27 additions and 3 deletions.
diff --git a/docs/data/index.html b/docs/data/index.html
@@ -2144,7 +2144,10 @@ <h1 class="title">Module <code>proteinflow.data</code></h1>
             self.crd_df, self.seq_df, self.ligands = self._parse_structure()
         else:
             self.crd_df, self.seq_df = self._parse_structure()
-        self.fasta_dict = self._parse_fasta()
+        try:
+            self.fasta_dict = self._parse_fasta()
+        except FileNotFoundError:
+            raise PDBError(&#34;FASTA file not found&#34;)
 
     @staticmethod
     def from_id(pdb_id, local_folder=&#34;.&#34;):
@@ -3015,7 +3018,10 @@ <h2 id="parameters">Parameters</h2>
             self.crd_df, self.seq_df, self.ligands = self._parse_structure()
         else:
             self.crd_df, self.seq_df = self._parse_structure()
-        self.fasta_dict = self._parse_fasta()
+        try:
+            self.fasta_dict = self._parse_fasta()
+        except FileNotFoundError:
+            raise PDBError(&#34;FASTA file not found&#34;)
 
     @staticmethod
     def from_id(pdb_id, local_folder=&#34;.&#34;):

diff --git a/docs/download/index.html b/docs/download/index.html
@@ -237,7 +237,7 @@ <h1 class="title">Module <code>proteinflow.download</code></h1>
     &#34;&#34;&#34;Download a FASTA file and return a local path or the PDB ID if download failed.&#34;&#34;&#34;
     try:
         return download_fasta(pdb_id, local_folder)
-    except RuntimeError:
+    except Exception:
         return pdb_id
 
 

diff --git a/docs/index.html b/docs/index.html
@@ -230,6 +230,22 @@ <h2 id="proteinflow-stable-releases">ProteinFlow Stable Releases</h2>
 <td>no</td>
 <td>v2.0.0</td>
 </tr>
+<tr>
+<td>20231221_sabdab</td>
+<td>21.12.23</td>
+<td>live 21.12.23</td>
+<td>1.8G</td>
+<td>3.5</td>
+<td>30</td>
+<td>10'000</td>
+<td>-</td>
+<td>0.3</td>
+<td>96/3/1</td>
+<td>0.5/0.2</td>
+<td>SAbDab</td>
+<td>no</td>
+<td>v2.6.1 (requires &gt;= v1.4.0)</td>
+</tr>
 </tbody>
 </table>
 <details class="source">
@@ -404,6 +420,7 @@ <h2 id="proteinflow-stable-releases">ProteinFlow Stable Releases</h2>
 |20230102_stable|27.02.23|20230102|28G|3.5|30|10&#39;000|-|0.3|90/5/5|0.3/0.1|PDB|yes|v1.1.1|
 |20230623_sabdab|26.06.23|live 26.06.23|1.4G|3.5|30|10&#39;000|-|0.3|96/3/1|0.5/0.2|SAbDab|no|v1.4.1 (requires &gt;= v1.4.0)|
 |20230102_v200|19.07.23|20230102|33G|3.5|30|10&#39;000|10|0.3|90/5/5|0.3/0.1|PDB|no|v2.0.0|
+|20231221_sabdab|21.12.23|live 21.12.23|1.8G|3.5|30|10&#39;000|-|0.3|96/3/1|0.5/0.2|SAbDab|no|v2.6.1 (requires &gt;= v1.4.0)|
 
 &#34;&#34;&#34;
 __pdoc__ = {

diff --git a/proteinflow/__init__.py b/proteinflow/__init__.py
@@ -166,6 +166,7 @@
 |20230102_stable|27.02.23|20230102|28G|3.5|30|10'000|-|0.3|90/5/5|0.3/0.1|PDB|yes|v1.1.1|
 |20230623_sabdab|26.06.23|live 26.06.23|1.4G|3.5|30|10'000|-|0.3|96/3/1|0.5/0.2|SAbDab|no|v1.4.1 (requires >= v1.4.0)|
 |20230102_v200|19.07.23|20230102|33G|3.5|30|10'000|10|0.3|90/5/5|0.3/0.1|PDB|no|v2.0.0|
+|20231221_sabdab|21.12.23|live 21.12.23|1.8G|3.5|30|10'000|-|0.3|96/3/1|0.5/0.2|SAbDab|no|v2.6.1 (requires >= v1.4.0)|
 
 """
 __pdoc__ = {