Skip to content

In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes

License

Notifications You must be signed in to change notification settings

YosefLab/Compass

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Compass

In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes

Metabolism is a major regulator of immune cell function, but it remains difficult to study the metabolic status of individual cells. This motivated the development of Compass, an algorithm to characterize cellular metabolic states based on single-cell RNA-Seq and flux balance analysis (FBA).

For instructions on how to install and use Compass, visit the documentation. For a detailed description of the algorithm, refer to Wagner et al., Cell 2021 (link).

About

In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages