Performance Testing

This testing framework performs stress/load testing on ARS, ARAs, KPs, sri-node-normalizer and sri-answer-appraiser services

Performance Test Runner Implementation

pip install PerformanceTestRunner 

CLI

The command-line interface is the easiest way to run the PerformanceTestRunner After installation, simply type PerformanceTestRunner --help to see required input arguments & options

• PerformanceTestRunner

  • env : the environment to run the queries against (dev|ci|test|prod)
  • count: number of concurrent queries to run
  • predicate: treats|affects
  • runner_setting: creative mode inidicator (inferred)
  • biolink_object_aspect_qualifier: activity_or_abundance
  • biolink_object_direction_qualifier: increased/decreased
  • input_category: input type category (Gene/ChemicalEntity)
  • input_curie: normalized curie taken from assest.csv
  • component: service to stress (ARS|ARAs|KPs|Utility)

• example:

  • PerformanceTestRunner --env 'ci' --count 5 --predicate '["biolink:treats", "biolink:affects","biolink:affects","biolink:treats", "biolink:affects"]' --runner_setting '["inferred"]' --biolink_object_aspect_qualifier '["","activity_or_abundance","activity_or_abundance","","activity_or_abundance"]' --biolink_object_direction_qualifier '["","increased","decreased","","increased"]' --input_category '["biolink:Disease","biolink:Gene","biolink:ChemicalEntity","biolink:Disease","biolink:Gene"]' --input_curie '["MONDO:0009265","NCBIGene:23394","PUBCHEM.COMPOUND:5881","MONDO:0015564","NCBIGene:4318"]' --component '["ARS","ARAs", "KPs", "Utility"]'

python

import asyncio
from PerformanceTestRunner.load_test import run_load_testing
asyncio.run(run_load_testing('ci',3, ['biolink:treats','biolink:affects','biolink:affects'],['inferred'],['','activity_or_abundance','activity_or_abundance'],['','increased','decreased'],['biolink:Disease','biolink:Gene','biolink:ChemicalEntity'],['MONDO:0009265','NCBIGene:23394','PUBCHEM.COMPOUND:5881'],['ARS','ARAs', 'KPs', 'Utility']))

OR

python load_test.py --env 'ci' --count 3 --predicate 'biolink:treats' 'biolink:affects' 'biolink:affects' --runner_setting 'inferred'  --biolink_object_aspect_qualifier '' 'activity_or_abundance' 'activity_or_abundance' --biolink_object_direction_qualifier '' 'increased' 'decreased'  --input_category 'biolink:Disease' 'biolink:Gene' 'biolink:ChemicalEntity' --input_curie 'MONDO:0009265' 'NCBIGene:23394' 'PUBCHEM.COMPOUND:5881' --component 'ARS' 'ARAs' 'KPs' 'Utility'