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Issues: SWC-Advanced-Microscopy/StitchIt
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syncAndCrunch on finished folder gives a cryptic error message
#210
opened Jan 12, 2024 by
raacampbell
SyncAndCrunch fails to start if current folder is the microscope raw data folder
bug
#206
opened Jan 18, 2023 by
mkrumin
syncadncrunch logic at the end of the acquisition on slow connection
#204
opened Nov 25, 2022 by
mkrumin
The wildcard used to stop existing instances of a syncAndCrunch acq can halt similarly named ones
bug
minor
#201
opened Nov 3, 2022 by
raacampbell
Does split illumination honour the new dominant tiling direction of BakingTray?
#195
opened Nov 30, 2021 by
raacampbell
stitched images have bottom and left edges cropped peeksection is ok
bug
high priority
#192
opened Jun 23, 2021 by
raacampbell
Stitching errors (such as tile rows not being laid down) should be logged somwhere
high priority
#188
opened Mar 6, 2021 by
raacampbell
Ensure we write stitched images which have file names that include the sample ID
high priority
#187
opened Feb 4, 2021 by
raacampbell
tileIndex file still being written by section preview
duplicate
minor
#173
opened Jul 16, 2020 by
raacampbell
What is the StitchIt_Log.txt file in the root of the analysis machine RAID array?
#172
opened Jul 15, 2020 by
raacampbell
Get bidirectional scanning correction working again
high priority
Major
#160
opened Feb 25, 2020 by
raacampbell
Samplesplitter is hard-coded to handle only 50 micron downsampled data
bug
#159
opened Feb 21, 2020 by
raacampbell
sampleSplitter fails to find brains in high contrast sample
bug
#155
opened Nov 22, 2019 by
raacampbell
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