Skip to content

PerinatalLab/ROH

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 

Repository files navigation

Autozygosity mapping and time-to-spontaneous delivery in Norwegian family-trios.

Abstract

Parental genetic relatedness may lead to adverse health and fitness outcomes in the offspring. It is not known whether it affects human delivery timing. Here, we use genotype data from ~20000 parent-offspring trios from the Norwegian Mother, Father and Child Cohort study to optimize runs of homozygosity (ROH) calling by maximising the correlation between parental genetic relatedness and offspring ROHs using different ROH calling parameters. We then estimate the effect of maternal, paternal, and fetal autozygosity and that of autozygosity mapping on the timing of delivery. Varying ROH calling parameters have a strong impact on the coefficient of determination between parental genetic relatedness and offspring ROH, ranging between 0.01-0.72. We observed no effect of maternal, paternal nor fetal autozygosity on spontaneous delivery timing, yet, we identified six maternal and six fetal loci not previously associated with the timing of spontaneous delivery. Moving beyond traditional genome-wide association studies has provided new insights on the genetic determinants and architecture of delivery timing.

About

No description, website, or topics provided.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published