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Install horovod in the ci-runner image for CI testing #712
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Click to view CI ResultsGitHub pull request #712 of commit a1f4b3a117f034111a40859d13762a06dcfebb22, no merge conflicts. Running as SYSTEM Setting status of a1f4b3a117f034111a40859d13762a06dcfebb22 to PENDING with url https://10.20.13.93:8080/job/merlin_merlin/543/console and message: 'Pending' Using context: Jenkins Building on master in workspace /var/jenkins_home/workspace/merlin_merlin using credential systems-login > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/NVIDIA-Merlin/Merlin # timeout=10 Fetching upstream changes from https://github.com/NVIDIA-Merlin/Merlin > git --version # timeout=10 using GIT_ASKPASS to set credentials login for merlin-systems > git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/Merlin +refs/pull/712/*:refs/remotes/origin/pr/712/* # timeout=10 > git rev-parse a1f4b3a117f034111a40859d13762a06dcfebb22^{commit} # timeout=10 Checking out Revision a1f4b3a117f034111a40859d13762a06dcfebb22 (detached) > git config core.sparsecheckout # timeout=10 > git checkout -f a1f4b3a117f034111a40859d13762a06dcfebb22 # timeout=10 Commit message: "Install horovod in the ci-runner image for CI testing" > git rev-list --no-walk 3744646c8a4ab16755acf43c1ebb89401b2ed063 # timeout=10 [merlin_merlin] $ /bin/bash /tmp/jenkins3380769157868729515.sh GLOB sdist-make: /var/jenkins_home/workspace/merlin_merlin/merlin/setup.py test-gpu recreate: /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/test-gpu test-gpu installdeps: pytest, pytest-cov WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration. test-gpu inst: /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/.tmp/package/1/merlin-0.0.1.zip WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration. test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,alembic==1.8.1,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,autopage==0.5.1,awscli==1.26.4,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.28.4,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cliff==4.0.0,cloudpickle==2.2.0,cmaes==0.8.2,cmake==3.24.1.1,cmd2==2.4.2,colorama==0.4.4,colorlog==6.7.0,contourpy==1.0.5,coverage==6.5.0,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,horovod==0.26.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.9.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.8.0,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Mako==1.2.3,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin==0.0.1,merlin-core==0.6.0+1.g5926fcf,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,optuna==3.0.3,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pbr==5.11.0,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,plotly==5.11.0,pluggy==1.0.0,prettytable==3.5.0,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyperclip==1.8.2,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-xdist==3.0.2,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.8.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.3.0,sphinx-multiversion==0.2.4,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@bd8c5d79b3f91cf5f1bb0d6995aeca3fe84b670e,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.42,stack-data==0.5.0,starlette==0.20.4,stevedore==4.1.0,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.9.2,tensorflow-estimator==2.9.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==2.0.1,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,typing-inspect==0.8.0,typing_extensions==4.3.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0 test-gpu run-test-pre: PYTHONHASHSEED='3859927445' test-gpu run-test: commands[0] | python -m pip install --upgrade git+https://github.com/NVIDIA-Merlin/systems.git Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com Collecting git+https://github.com/NVIDIA-Merlin/systems.git Cloning https://github.com/NVIDIA-Merlin/systems.git to /tmp/pip-req-build-4qoqwlm9 Running command git clone --filter=blob:none --quiet https://github.com/NVIDIA-Merlin/systems.git /tmp/pip-req-build-4qoqwlm9 Resolved https://github.com/NVIDIA-Merlin/systems.git to commit 9a5deabc4dc8fbaefb58b8d2da9dedfe042cb465 Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Requirement already satisfied: requests<3,>=2.10 in /usr/lib/python3/dist-packages (from merlin-systems==0.7.0+8.g9a5deab) (2.22.0) Requirement already satisfied: merlin-core>=0.2.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-systems==0.7.0+8.g9a5deab) (0.3.0+12.g78ecddd) Requirement already satisfied: nvtabular>=1.0.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-systems==0.7.0+8.g9a5deab) (1.1.1) Requirement already satisfied: pyarrow>=5.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (7.0.0) Requirement already satisfied: betterproto<2.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.2.5) Requirement already satisfied: numba>=0.54 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (0.55.1) Requirement already satisfied: dask>=2021.11.2 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2022.3.0) Requirement already satisfied: packaging in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (21.3) Requirement already satisfied: pandas<1.4.0dev0,>=1.2.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.3.5) Requirement already satisfied: tqdm>=4.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (4.64.1) Requirement already satisfied: protobuf>=3.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (3.19.5) Requirement already satisfied: tensorflow-metadata>=1.2.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.10.0) Requirement already satisfied: distributed>=2021.11.2 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2022.3.0) Requirement already satisfied: stringcase in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.2.0) Requirement already satisfied: grpclib in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (0.4.3) Requirement already satisfied: partd>=0.3.10 in /var/jenkins_home/.local/lib/python3.8/site-packages/partd-1.2.0-py3.8.egg (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.2.0) Requirement already satisfied: toolz>=0.8.2 in /usr/local/lib/python3.8/dist-packages (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (0.12.0) Requirement already satisfied: pyyaml>=5.3.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/PyYAML-5.4.1-py3.8-linux-x86_64.egg (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (5.4.1) Requirement already satisfied: fsspec>=0.6.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2022.5.0) Requirement already satisfied: cloudpickle>=1.1.1 in /usr/local/lib/python3.8/dist-packages (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2.2.0) Requirement already satisfied: zict>=0.1.3 in /var/jenkins_home/.local/lib/python3.8/site-packages/zict-2.0.0-py3.8.egg (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2.0.0) Requirement already satisfied: tblib>=1.6.0 in /var/jenkins_home/.local/lib/python3.8/site-packages/tblib-1.7.0-py3.8.egg (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.7.0) Requirement already satisfied: msgpack>=0.6.0 in /usr/local/lib/python3.8/dist-packages (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.0.4) Requirement already satisfied: psutil>=5.0 in /var/jenkins_home/.local/lib/python3.8/site-packages/psutil-5.8.0-py3.8-linux-x86_64.egg (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (5.8.0) Requirement already satisfied: sortedcontainers!=2.0.0,!=2.0.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/sortedcontainers-2.4.0-py3.8.egg (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2.4.0) Requirement already satisfied: jinja2 in /usr/local/lib/python3.8/dist-packages (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (3.1.2) Requirement already satisfied: tornado>=6.0.3 in /var/jenkins_home/.local/lib/python3.8/site-packages/tornado-6.1-py3.8-linux-x86_64.egg (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (6.1) Requirement already satisfied: click>=6.6 in /usr/local/lib/python3.8/dist-packages (from distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (8.1.3) Collecting llvmlite<0.39,>=0.38.0rc1 Downloading llvmlite-0.38.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (34.5 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 34.5/34.5 MB 48.1 MB/s eta 0:00:00 Requirement already satisfied: numpy<1.22,>=1.18 in /var/jenkins_home/.local/lib/python3.8/site-packages (from numba>=0.54->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.20.3) Requirement already satisfied: setuptools in ./.tox/test-gpu/lib/python3.8/site-packages (from numba>=0.54->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (65.4.1) Requirement already satisfied: pyparsing!=3.0.5,>=2.0.2 in /usr/local/lib/python3.8/dist-packages (from packaging->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (3.0.9) Requirement already satisfied: pytz>=2017.3 in /usr/local/lib/python3.8/dist-packages (from pandas<1.4.0dev0,>=1.2.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2022.2.1) Requirement already satisfied: python-dateutil>=2.7.3 in /usr/local/lib/python3.8/dist-packages (from pandas<1.4.0dev0,>=1.2.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2.8.2) Requirement already satisfied: absl-py<2.0.0,>=0.9 in /usr/local/lib/python3.8/dist-packages (from tensorflow-metadata>=1.2.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.2.0) Requirement already satisfied: googleapis-common-protos<2,>=1.52.0 in /usr/local/lib/python3.8/dist-packages (from tensorflow-metadata>=1.2.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.52.0) Requirement already satisfied: locket in /var/jenkins_home/.local/lib/python3.8/site-packages/locket-0.2.1-py3.8.egg (from partd>=0.3.10->dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (0.2.1) Requirement already satisfied: six>=1.5 in /var/jenkins_home/.local/lib/python3.8/site-packages (from python-dateutil>=2.7.3->pandas<1.4.0dev0,>=1.2.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.15.0) Requirement already satisfied: heapdict in /var/jenkins_home/.local/lib/python3.8/site-packages/HeapDict-1.0.1-py3.8.egg (from zict>=0.1.3->distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.0.1) Requirement already satisfied: multidict in /usr/local/lib/python3.8/dist-packages (from grpclib->betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (6.0.2) Requirement already satisfied: h2<5,>=3.1.0 in /usr/local/lib/python3.8/dist-packages (from grpclib->betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (4.1.0) Requirement already satisfied: MarkupSafe>=2.0 in /usr/local/lib/python3.8/dist-packages (from jinja2->distributed>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2.1.1) Requirement already satisfied: hpack<5,>=4.0 in /usr/local/lib/python3.8/dist-packages (from h2<5,>=3.1.0->grpclib->betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (4.0.0) Requirement already satisfied: hyperframe<7,>=6.0 in /usr/local/lib/python3.8/dist-packages (from h2<5,>=3.1.0->grpclib->betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (6.0.1) Building wheels for collected packages: merlin-systems Building wheel for merlin-systems (pyproject.toml): started Building wheel for merlin-systems (pyproject.toml): finished with status 'done' Created wheel for merlin-systems: filename=merlin_systems-0.7.0+8.g9a5deab-py3-none-any.whl size=86639 sha256=ac3b5d3a3d4bddd68debe3c4e5cba2ff107d9846182c77450567c659570411cf Stored in directory: /tmp/pip-ephem-wheel-cache-rr5j9i3o/wheels/d3/db/b8/99d510a979c278774eda4142f1c0643c93b7b2674aff321c16 Successfully built merlin-systems Installing collected packages: llvmlite, merlin-systems Attempting uninstall: llvmlite Found existing installation: llvmlite 0.39.1 Not uninstalling llvmlite at /usr/local/lib/python3.8/dist-packages, outside environment /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/test-gpu Can't uninstall 'llvmlite'. No files were found to uninstall. Attempting uninstall: merlin-systems Found existing installation: merlin-systems 0.5.0+4.g15074ad Not uninstalling merlin-systems at /usr/local/lib/python3.8/dist-packages, outside environment /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/test-gpu Can't uninstall 'merlin-systems'. No files were found to uninstall. Successfully installed llvmlite-0.38.1 merlin-systems-0.7.0+8.g9a5deab |
Click to view CI ResultsGitHub pull request #712 of commit bd56ceecd707dfe26007fc8c1f117b86cd806ac2, no merge conflicts. Running as SYSTEM Setting status of bd56ceecd707dfe26007fc8c1f117b86cd806ac2 to PENDING with url https://10.20.13.93:8080/job/merlin_merlin/544/console and message: 'Pending' Using context: Jenkins Building on master in workspace /var/jenkins_home/workspace/merlin_merlin using credential systems-login > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/NVIDIA-Merlin/Merlin # timeout=10 Fetching upstream changes from https://github.com/NVIDIA-Merlin/Merlin > git --version # timeout=10 using GIT_ASKPASS to set credentials login for merlin-systems > git fetch --tags --force --progress -- https://github.com/NVIDIA-Merlin/Merlin +refs/pull/712/*:refs/remotes/origin/pr/712/* # timeout=10 > git rev-parse bd56ceecd707dfe26007fc8c1f117b86cd806ac2^{commit} # timeout=10 Checking out Revision bd56ceecd707dfe26007fc8c1f117b86cd806ac2 (detached) > git config core.sparsecheckout # timeout=10 > git checkout -f bd56ceecd707dfe26007fc8c1f117b86cd806ac2 # timeout=10 Commit message: "Merge branch 'main' into ci-runner-install-horovod" > git rev-list --no-walk a1f4b3a117f034111a40859d13762a06dcfebb22 # timeout=10 [merlin_merlin] $ /bin/bash /tmp/jenkins7886567480714386798.sh GLOB sdist-make: /var/jenkins_home/workspace/merlin_merlin/merlin/setup.py test-gpu recreate: /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/test-gpu test-gpu installdeps: pytest, pytest-cov WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration. test-gpu inst: /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/.tmp/package/1/merlin-0.0.1.zip WARNING: Discarding $PYTHONPATH from environment, to override specify PYTHONPATH in 'passenv' in your configuration. test-gpu installed: absl-py==1.2.0,aiohttp==3.8.1,aiosignal==1.2.0,alabaster==0.7.12,alembic==1.8.1,anyio==3.6.1,argon2-cffi==21.3.0,argon2-cffi-bindings==21.2.0,astroid==2.5.6,asttokens==2.0.8,astunparse==1.6.3,asv==0.5.1,asvdb==0.4.2,async-timeout==4.0.2,attrs==22.1.0,autopage==0.5.1,awscli==1.26.4,Babel==2.10.3,backcall==0.2.0,beautifulsoup4==4.11.1,betterproto==1.2.5,black==22.6.0,bleach==5.0.1,boto3==1.24.75,botocore==1.28.4,Brotli==1.0.9,cachetools==5.2.0,certifi==2019.11.28,cffi==1.15.1,chardet==3.0.4,charset-normalizer==2.1.1,clang==5.0,click==8.1.3,cliff==4.0.0,cloudpickle==2.2.0,cmaes==0.8.2,cmake==3.24.1.1,cmd2==2.4.2,colorama==0.4.4,colorlog==6.7.0,contourpy==1.0.5,coverage==6.5.0,cuda-python==11.7.1,cupy-cuda117==10.6.0,cycler==0.11.0,Cython==0.29.32,dask==2022.1.1,dbus-python==1.2.16,debugpy==1.6.3,decorator==5.1.1,defusedxml==0.7.1,dill==0.3.5.1,distlib==0.3.6,distributed==2022.5.1,distro==1.7.0,dm-tree==0.1.6,docker-pycreds==0.4.0,docutils==0.16,emoji==1.7.0,entrypoints==0.4,execnet==1.9.0,executing==1.0.0,faiss==1.7.2,faiss-gpu==1.7.2,fastai==2.7.9,fastapi==0.85.0,fastavro==1.6.1,fastcore==1.5.27,fastdownload==0.0.7,fastjsonschema==2.16.1,fastprogress==1.0.3,fastrlock==0.8,feast==0.19.4,fiddle==0.2.2,filelock==3.8.0,flatbuffers==1.12,fonttools==4.37.3,frozenlist==1.3.1,fsspec==2022.5.0,gast==0.4.0,gevent==21.12.0,geventhttpclient==2.0.2,gitdb==4.0.9,GitPython==3.1.27,google==3.0.0,google-api-core==2.10.1,google-auth==2.11.1,google-auth-oauthlib==0.4.6,google-pasta==0.2.0,googleapis-common-protos==1.52.0,graphviz==0.20.1,greenlet==1.1.3,grpcio==1.41.0,grpcio-channelz==1.49.0,grpcio-reflection==1.48.1,grpclib==0.4.3,h11==0.13.0,h2==4.1.0,h5py==3.7.0,HeapDict==1.0.1,horovod==0.26.1,hpack==4.0.0,httptools==0.5.0,hugectr2onnx==0.0.0,huggingface-hub==0.9.1,hyperframe==6.0.1,idna==2.8,imagesize==1.4.1,implicit==0.6.1,importlib-metadata==4.12.0,importlib-resources==5.9.0,iniconfig==1.1.1,ipykernel==6.15.3,ipython==8.5.0,ipython-genutils==0.2.0,ipywidgets==7.7.0,jedi==0.18.1,Jinja2==3.1.2,jmespath==1.0.1,joblib==1.2.0,json5==0.9.10,jsonschema==4.16.0,jupyter-cache==0.4.3,jupyter-core==4.11.1,jupyter-server==1.18.1,jupyter-server-mathjax==0.2.5,jupyter-sphinx==0.3.2,jupyter_client==7.3.5,jupyterlab==3.4.7,jupyterlab-pygments==0.2.2,jupyterlab-widgets==1.1.0,jupyterlab_server==2.15.1,keras==2.9.0,Keras-Preprocessing==1.1.2,kiwisolver==1.4.4,lazy-object-proxy==1.8.0,libclang==14.0.6,libcst==0.4.7,lightfm==1.16,lightgbm==3.3.2,linkify-it-py==1.0.3,llvmlite==0.39.1,locket==1.0.0,lxml==4.9.1,Mako==1.2.3,Markdown==3.4.1,markdown-it-py==1.1.0,MarkupSafe==2.1.1,matplotlib==3.6.0,matplotlib-inline==0.1.6,mdit-py-plugins==0.2.8,merlin==0.0.1,merlin-core==0.6.0+1.g5926fcf,merlin-models==0.7.0+11.g280956aa4,merlin-systems==0.5.0+4.g15074ad,mistune==2.0.4,mmh3==3.0.0,mpi4py==3.1.3,msgpack==1.0.4,multidict==6.0.2,mypy-extensions==0.4.3,myst-nb==0.13.2,myst-parser==0.15.2,natsort==8.1.0,nbclassic==0.4.3,nbclient==0.6.8,nbconvert==7.0.0,nbdime==3.1.1,nbformat==5.5.0,nest-asyncio==1.5.5,ninja==1.10.2.3,notebook==6.4.12,notebook-shim==0.1.0,numba==0.56.2,numpy==1.22.4,nvidia-pyindex==1.0.9,# Editable install with no version control (nvtabular==1.4.0+8.g95e12d347),-e /usr/local/lib/python3.8/dist-packages,nvtx==0.2.5,oauthlib==3.2.1,oldest-supported-numpy==2022.8.16,onnx==1.12.0,onnxruntime==1.11.1,opt-einsum==3.3.0,optuna==3.0.3,packaging==21.3,pandas==1.3.5,pandavro==1.5.2,pandocfilters==1.5.0,parso==0.8.3,partd==1.3.0,pathtools==0.1.2,pbr==5.11.0,pexpect==4.8.0,pickleshare==0.7.5,Pillow==9.2.0,pkgutil_resolve_name==1.3.10,platformdirs==2.5.2,plotly==5.11.0,pluggy==1.0.0,prettytable==3.5.0,prometheus-client==0.14.1,promise==2.3,prompt-toolkit==3.0.31,proto-plus==1.19.6,protobuf==3.19.5,psutil==5.9.2,ptyprocess==0.7.0,pure-eval==0.2.2,py==1.11.0,pyarrow==7.0.0,pyasn1==0.4.8,pyasn1-modules==0.2.8,pybind11==2.10.0,pycparser==2.21,pydantic==1.10.2,pydot==1.4.2,Pygments==2.13.0,PyGObject==3.36.0,pynvml==11.4.1,pyparsing==3.0.9,pyperclip==1.8.2,pyrsistent==0.18.1,pytest==7.1.3,pytest-cov==4.0.0,pytest-xdist==3.0.2,python-apt==2.0.0+ubuntu0.20.4.8,python-dateutil==2.8.2,python-dotenv==0.21.0,python-rapidjson==1.8,pytz==2022.2.1,PyYAML==5.4.1,pyzmq==24.0.0,regex==2022.9.13,requests==2.22.0,requests-oauthlib==1.3.1,requests-unixsocket==0.2.0,rsa==4.7.2,s3fs==2022.2.0,s3transfer==0.6.0,sacremoses==0.0.53,scikit-build==0.15.0,scikit-learn==1.1.2,scipy==1.8.1,seedir==0.3.0,Send2Trash==1.8.0,sentry-sdk==1.9.8,setproctitle==1.3.2,setuptools-scm==7.0.5,shortuuid==1.0.9,six==1.15.0,sklearn==0.0,smmap==5.0.0,sniffio==1.3.0,snowballstemmer==2.2.0,sortedcontainers==2.4.0,soupsieve==2.3.2.post1,Sphinx==5.3.0,sphinx-multiversion==0.2.4,sphinx-togglebutton==0.3.1,sphinx_external_toc==0.3.0,sphinxcontrib-applehelp==1.0.2,sphinxcontrib-copydirs @ git+https://github.com/mikemckiernan/sphinxcontrib-copydirs.git@bd8c5d79b3f91cf5f1bb0d6995aeca3fe84b670e,sphinxcontrib-devhelp==1.0.2,sphinxcontrib-htmlhelp==2.0.0,sphinxcontrib-jsmath==1.0.1,sphinxcontrib-qthelp==1.0.3,sphinxcontrib-serializinghtml==1.1.5,SQLAlchemy==1.4.42,stack-data==0.5.0,starlette==0.20.4,stevedore==4.1.0,stringcase==1.2.0,supervisor==4.1.0,tabulate==0.8.10,tblib==1.7.0,tdqm==0.0.1,tenacity==8.0.1,tensorboard==2.9.1,tensorboard-data-server==0.6.1,tensorboard-plugin-wit==1.8.1,tensorflow==2.9.2,tensorflow-estimator==2.9.0,tensorflow-gpu==2.9.2,tensorflow-io-gcs-filesystem==0.27.0,tensorflow-metadata==1.10.0,termcolor==2.0.1,terminado==0.15.0,testbook==0.4.2,threadpoolctl==3.1.0,tinycss2==1.1.1,tokenizers==0.10.3,toml==0.10.2,tomli==2.0.1,toolz==0.12.0,torch==1.12.1+cu113,torchmetrics==0.3.2,tornado==6.2,tox==3.26.0,tqdm==4.64.1,traitlets==5.4.0,transformers==4.12.0,transformers4rec==0.1.12+2.gbcc939255,treelite==2.3.0,treelite-runtime==2.3.0,tritonclient==2.25.0,typing-inspect==0.8.0,typing_extensions==4.3.0,uc-micro-py==1.0.1,urllib3==1.26.12,uvicorn==0.18.3,uvloop==0.17.0,versioneer==0.20,virtualenv==20.16.5,wandb==0.13.3,watchfiles==0.17.0,wcwidth==0.2.5,webencodings==0.5.1,websocket-client==1.4.1,websockets==10.3,Werkzeug==2.2.2,widgetsnbextension==3.6.0,wrapt==1.12.1,xgboost==1.6.2,yarl==1.8.1,zict==2.2.0,zipp==3.8.1,zope.event==4.5.0,zope.interface==5.4.0 test-gpu run-test-pre: PYTHONHASHSEED='3638139299' test-gpu run-test: commands[0] | python -m pip install --upgrade git+https://github.com/NVIDIA-Merlin/systems.git Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com Collecting git+https://github.com/NVIDIA-Merlin/systems.git Cloning https://github.com/NVIDIA-Merlin/systems.git to /tmp/pip-req-build-geu3r7zl Running command git clone --filter=blob:none --quiet https://github.com/NVIDIA-Merlin/systems.git /tmp/pip-req-build-geu3r7zl Resolved https://github.com/NVIDIA-Merlin/systems.git to commit 9a5deabc4dc8fbaefb58b8d2da9dedfe042cb465 Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Requirement already satisfied: nvtabular>=1.0.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-systems==0.7.0+8.g9a5deab) (1.1.1) Requirement already satisfied: merlin-core>=0.2.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-systems==0.7.0+8.g9a5deab) (0.3.0+12.g78ecddd) Requirement already satisfied: requests<3,>=2.10 in /usr/lib/python3/dist-packages (from merlin-systems==0.7.0+8.g9a5deab) (2.22.0) Requirement already satisfied: numba>=0.54 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (0.55.1) Requirement already satisfied: tqdm>=4.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (4.64.1) Requirement already satisfied: distributed>=2021.11.2 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2022.3.0) Requirement already satisfied: pandas<1.4.0dev0,>=1.2.0 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.3.5) Requirement already satisfied: protobuf>=3.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (3.19.5) Requirement already satisfied: tensorflow-metadata>=1.2.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.10.0) Requirement already satisfied: packaging in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (21.3) Requirement already satisfied: dask>=2021.11.2 in /var/jenkins_home/.local/lib/python3.8/site-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2022.3.0) Requirement already satisfied: pyarrow>=5.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (7.0.0) Requirement already satisfied: betterproto<2.0.0 in /usr/local/lib/python3.8/dist-packages (from merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.2.5) Requirement already satisfied: grpclib in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (0.4.3) Requirement already satisfied: stringcase in /usr/local/lib/python3.8/dist-packages (from betterproto<2.0.0->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (1.2.0) Requirement already satisfied: cloudpickle>=1.1.1 in /usr/local/lib/python3.8/dist-packages (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (2.2.0) Requirement already satisfied: pyyaml>=5.3.1 in /var/jenkins_home/.local/lib/python3.8/site-packages/PyYAML-5.4.1-py3.8-linux-x86_64.egg (from dask>=2021.11.2->merlin-core>=0.2.0->merlin-systems==0.7.0+8.g9a5deab) (5.4.1) Requirement already satisfied: toolz>=0.8.2 in /usr/local/lib/python3.8/dist-packages (from 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No files were found to uninstall. Attempting uninstall: merlin-systems Found existing installation: merlin-systems 0.5.0+4.g15074ad Not uninstalling merlin-systems at /usr/local/lib/python3.8/dist-packages, outside environment /var/jenkins_home/workspace/merlin_merlin/merlin/.tox/test-gpu Can't uninstall 'merlin-systems'. No files were found to uninstall. Successfully installed llvmlite-0.38.1 merlin-systems-0.7.0+8.g9a5deab |
This PR installs horovod in the merlin-ci-runner image.
Horovod is pulled from the DLFW container in release containers, but it's currently not installed in the merlin-ci-runner container.
This PR installs it in the CI runner container so we can test features related to horovod.
I also tried installing it in a tox environment, but it turned out to be tricky and the tests failed for some reason even if the installation was successful.
Installing it in the
dockerfile.ci
file system-wide and running the unit tests in Models turned out successful.After installing horovod, we could revisit enabling tests that are using horovod in the CI, e.g., one in NVTabular.
Testing
docker build -t merlin-ci-runner -f ci/dockerfile.ci .
was successful.All tests passed in this Models PR including
horovodrun
tests.