data_multisession_testing

Light-weight real data for our integrated multi-session testings

Data Source

• Derived partially from publicly available at https://smart-stats-tools.org/lesion-challenge-2015,
• Nii file source here: https://smart-stats-tools.org/sites/default/files/lesion_challenge/training_final_v4.zip
• Description and acquisition protocol here: https://smart-stats-tools.org/sites/default/files/lesion_challenge/Training_data_description.pdf

Content

• sub-ms01: BIDS folder with multiple contrast (T1w/MPRAGE, T2w, FLAIR). Original image and derivatives (see below) are the first subject from post processed data from MS lesion challenge 2015.
  • 4 Sessions
• sub-ms02: BIDS folder with multiple contrast (T1w/MPRAGE, T2w, FLAIR). Original image and derivatives (see below) are the second subject from post processed data from MS lesion challenge 2015.
  • 4 Sessions
• sub-ms03: BIDS folder with multiple contrast (T1w/MPRAGE, T2w, FLAIR). Original image and derivatives (see below) are the third subject from post processed data from MS lesion challenge 2015.
  • 5 Sessions
• derivatives/labels/sub-ms01/ses-01: derivatives folder with the following labels (using sub-ms01/ses-01 as example):
  • _lesion-manual-rater1.nii: dummy labels which are supposed to represent lesion segmentation. WARNING: these are not actual lesion segmentations, but are only here for the purpose of testing the workflow of ivadomed codebase.
  • _lesion-manual-rater2.nii: dummy labels which are supposed to represent lesion segmentation. WARNING: these are not actual lesion segmentations, but are only here for the purpose of testing the workflow of ivadomed codebase.