module data input #74
Open
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Contributor
myushen
commented
Jul 30, 2024
myushen
commented
- enabling gene nomenclature option in the pipeline
- fixing functions for anndata input
Merge branch 'master' into module-data-input Conflicts: R/functions.R R/modules_grammar_hpc.R
Merge branch 'master' into module-data-input Conflicts: tests/testthat/test_single_functions.R
commit 44a9103 Author: Mengyuan Shen <mengyuan.shen@outlook.com> Date: Thu Aug 15 10:32:04 2024 +1000 update transformation function commit ef88d91 Author: myushen <mengyuan.shen@outlook.com> Date: Wed Aug 14 19:19:11 2024 +1000 update transformation function commit 3d6d946 Author: myushen <mengyuan.shen@outlook.com> Date: Wed Aug 14 17:04:48 2024 +1000 testthat for census data commit f393990 Author: myushen <mengyuan.shen@outlook.com> Date: Fri Aug 9 17:30:34 2024 +1000 fix the pipeline for census anndata input commit eff84af Author: myushen <mengyuan.shen@outlook.com> Date: Tue Aug 6 14:35:27 2024 +1000 fix pipeline commit e8c56ad Author: myushen <mengyuan.shen@outlook.com> Date: Mon Aug 5 15:44:16 2024 +1000 save transform assay in different formats commit 157d6dc Merge: 289a037 188f0b5 Author: myushen <mengyuan.shen@outlook.com> Date: Mon Aug 5 11:21:17 2024 +1000 fix conflicts Merge remote-tracking branch 'remotes/upstream/custom_input_names' into transform-assays Conflicts: R/functions.R R/modules_grammar_hpc.R tests/testthat/test_single_functions.R commit 188f0b5 Author: stemangiola <mangiolastefano@gmail.com> Date: Mon Aug 5 00:49:11 2024 +1000 update output names commit 52c0e73 Author: stemangiola <mangiolastefano@gmail.com> Date: Sun Aug 4 23:48:02 2024 +1000 SCT delay array commit bb4ca16 Author: stemangiola <mangiolastefano@gmail.com> Date: Sun Aug 4 19:10:20 2024 +1000 add list of functions commit 80cf0c2 Author: stemangiola <mangiolastefano@gmail.com> Date: Sun Aug 4 17:53:28 2024 +1000 fix argument commit 0412643 Author: stemangiola <mangiolastefano@gmail.com> Date: Sun Aug 4 17:49:43 2024 +1000 fix output names setting commit b4003b7 Author: stemangiola <mangiolastefano@gmail.com> Date: Sun Aug 4 14:34:39 2024 +1000 fix DE commit 50a1a5d Author: stemangiola <mangiolastefano@gmail.com> Date: Sun Aug 4 11:29:39 2024 +1000 fixed custom input for some functions commit a9f89e6 Merge: 78b5553 05b75d2 Author: stemangiola <mangiolastefano@gmail.com> Date: Sat Aug 3 00:01:00 2024 +1000 Merge branch 'master' into custom_input_names commit 05b75d2 Author: stemangiola <mangiolastefano@gmail.com> Date: Sat Aug 3 00:00:19 2024 +1000 intentate commit 78b5553 Author: stemangiola <mangiolastefano@gmail.com> Date: Fri Aug 2 22:49:58 2024 +1000 make input target dynamic
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.