Add duckdb build/concepts and use SQLGlot to convert BigQuery SQL into other dialects #51
Workflow file for this run
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name: SQLFluff | |
on: | |
- pull_request | |
jobs: | |
lint-mimic-iv: | |
runs-on: ubuntu-latest | |
steps: | |
- name: checkout | |
uses: actions/checkout@v3 | |
- name: Install Python | |
uses: "actions/setup-python@v2" | |
with: | |
python-version: "3.7" | |
- name: install sqlfluff | |
run: "pip install sqlfluff==1.4.5" | |
- name: Get changed files | |
id: get_file_changes | |
uses: trilom/file-changes-action@v1.2.4 | |
with: | |
output: ' ' | |
- name: Get changed .sql files in mimic-iv concepts folder | |
id: get_files_to_lint | |
shell: bash -l {0} | |
run: | | |
# Set the command in the $() brackets as an output to use in later steps | |
echo "lintees=$( | |
echo \ | |
$(echo ${{ steps.get_file_changes.outputs.files_modified }} | | |
tr -s ' ' '\n' | | |
grep -E '^mimic-iv/concepts/.*[.]sql$' | | |
tr -s '\n' ' ') \ | |
$(echo ${{ steps.get_file_changes.outputs.files_added }} | | |
tr -s ' ' '\n' | | |
grep -E '^mimic-iv/concepts/.*[.]sql$' | | |
tr -s '\n' ' ') | |
) >> $GITHUB_OUTPUT" | |
- name: Lint SQL files | |
id: sqlfluff_json | |
if: steps.get_files_to_lint.outputs.lintees != '' | |
shell: bash -l {0} | |
run: sqlfluff lint --format github-annotation --annotation-level failure --nofail ${{ steps.get_files_to_lint.outputs.lintees }} > annotations.json | |
- name: Annotate | |
uses: yuzutech/annotations-action@v0.3.0 | |
with: | |
repo-token: "${{ secrets.GITHUB_TOKEN }}" | |
title: "SQLFluff Lint" | |
input: "./annotations.json" |