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31 Open 0 Closed
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Issues list

Detect when Java is absent bug
#31 opened Sep 12, 2018 by schae234
Design the Cassandra database schema for variants
#30 opened Feb 8, 2018 by schae234 First Sprint
@schae234
1
Read up on Spark and Cassandra
#29 opened Feb 8, 2018 by schae234 First Sprint
1
Add tests to make sure Imputation is working as expected
#28 opened Feb 8, 2018 by schae234 First Sprint
Create a prototype of HapDab that is backed by Spark Epic
#27 opened Feb 8, 2018 by schae234 First Sprint
Cover use cases from MNEc2M Paper
#26 opened Feb 8, 2018 by schae234 First Sprint
Pull in VCFs faster than SQLite
#25 opened Feb 8, 2018 by schae234 First Sprint
1
Change VCF I/O to pull from Cassandra
#24 opened Feb 8, 2018 by schae234 First Sprint
Integrate tightly with other LinkageIO repos
#23 opened Feb 7, 2018 by schae234 First Sprint
Maintain a useful docker image
#22 opened Feb 7, 2018 by schae234 First Sprint
Use current, but reliable stack technologies
#21 opened Feb 7, 2018 by schae234 First Sprint
Maintain a documented and well designed API
#20 opened Feb 7, 2018 by schae234
Have numpy style docstrings for all methods
#19 opened Feb 7, 2018 by schae234
Craft high quality code and API Epic
#18 opened Feb 7, 2018 by schae234
Release FOSS licensed code
#17 opened Feb 7, 2018 by schae234
Release high quality software Epic
#16 opened Feb 7, 2018 by schae234
Have code and analysis examples
#15 opened Feb 7, 2018 by schae234
Have continuous documentation
#14 opened Feb 7, 2018 by schae234
Release stable code regularly
#13 opened Feb 7, 2018 by schae234
Develop code continuously
#12 opened Feb 7, 2018 by schae234
Include regression tests with bug fixes
#11 opened Feb 7, 2018 by schae234
High unit test coverage
#10 opened Feb 7, 2018 by schae234
One line installation through conda
#9 opened Feb 7, 2018 by schae234
Establish Continious Integration
#8 opened Feb 7, 2018 by schae234
Determine Imputation accuracy Epic
#7 opened Feb 7, 2018 by schae234
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