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Create a demo of querying OBO in SQL in the browser using sql.js #63

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cmungall opened this issue Dec 1, 2022 · 4 comments
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@cmungall
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cmungall commented Dec 1, 2022

h/t @kltm
https://sql.js.org/#/

@kltm
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kltm commented Dec 3, 2022

@kltm
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kltm commented Dec 4, 2022

A few thoughts about this:

  • while the file sizes are large, on good internet they are not terrible
  • workers could download a prioritized list in the background
  • there may be new standard browser API settings that could allow this to be locally cached and only updates downloaded?
  • if a subset of OAK commands that are backed by sqlite3 could be ported to JS (manually or wasm), it might make for a nice bit of advertising and playground
  • "federated queries"
  • may be nice to embed as part of tools so new ontology developers could get something braggable up quickly
  • if GO (or anybody else, i.e. OBO) produced sqlite3 files as part of the distro, something like this could easily be embedded to make an easy per-release playground
  • "GOOSE"

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kltm commented Dec 5, 2022

@kltm
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kltm commented Dec 5, 2022

@cmungall Now all ontologies: https://go-public.s3.amazonaws.com/db.html

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