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@HUBioDataLab

Hacettepe University Biological Data Science Laboratory

An academic research laboratory focusing on machine/deep learning applications in the fields of bioinformatics and cheminformatics

Popular repositories

  1. SELFormer SELFormer Public

    SELFormer: Molecular Representation Learning via SELFIES Language Models

    Python 68 14

  2. DrugGEN DrugGEN Public

    Official implementation of DrugGEN

    Python 44 15

  3. ProtBENCH ProtBENCH Public

    Forked from hevalatas/ProtBENCH

    Python 11 2

  4. DrugApp DrugApp Public

    Forked from fulyaciray/DrugApp

    Python 7

  5. CROssBARv2 CROssBARv2 Public

    This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher

    Python 6 6

  6. awesome-denovo-papers awesome-denovo-papers Public

    Forked from asarigun/awesome-denovo-papers

    Awesome De novo drugs design papers

    4

Repositories

Showing 10 of 22 repositories
  • DeepResponse Public Forked from burakcan-izmirli/DeepResponse

    DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling

    HUBioDataLab/DeepResponse’s past year of commit activity
    Python 0 3 0 0 Updated Aug 25, 2024
  • CROssBAR_LLM Public
    HUBioDataLab/CROssBAR_LLM’s past year of commit activity
    Python 2 0 0 0 Updated Aug 15, 2024
  • DEEPScreen2 Public Forked from stolyassa/DEEPScreen2
    HUBioDataLab/DEEPScreen2’s past year of commit activity
    Jupyter Notebook 0 5 0 6 Updated Aug 13, 2024
  • Prot2Mol Public

    Target based molecule generation using protein embeddings and SELFIES molecule representation

    HUBioDataLab/Prot2Mol’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Aug 13, 2024
  • Domain2GO Public Forked from ervau/Domain2GO

    A Python tool for predicting protein functions by associating domains with Gene Ontology terms using existing domain and GO annotation data

    HUBioDataLab/Domain2GO’s past year of commit activity
    Python 1 1 0 0 Updated Aug 12, 2024
  • DrugGEN Public

    Official implementation of DrugGEN

    HUBioDataLab/DrugGEN’s past year of commit activity
    Python 44 GPL-3.0 15 2 2 Updated Jul 31, 2024
  • ASCARIS Public Forked from fatmacankara/ASCARIS

    ASCARIS: Annotation & Structure-Based Representation of SAVs

    HUBioDataLab/ASCARIS’s past year of commit activity
    Python 1 3 0 0 Updated Jul 22, 2024
  • SELFormer Public

    SELFormer: Molecular Representation Learning via SELFIES Language Models

    HUBioDataLab/SELFormer’s past year of commit activity
    Python 68 14 2 0 Updated Jun 29, 2024
  • SELFormer_back Public Forked from didar00/Final-Project

    SELFormer: Molecular Representation Learning via SELFIES Language Models

    HUBioDataLab/SELFormer_back’s past year of commit activity
    Python 4 3 0 0 Updated Jun 29, 2024
  • SELFormerv2 Public
    HUBioDataLab/SELFormerv2’s past year of commit activity
    Python 0 0 0 0 Updated Jun 4, 2024
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