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@FBK-NILab

NILab Neuroinformatics Laboratory

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  1. DecMeg2014 DecMeg2014 Public

    Official Repository of the code associated with the data analysis competition DecMeg2014

    Python 25 31

  2. HCP-Tractography HCP-Tractography Public

    Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset

    Python 9 10

  3. app-classifyber app-classifyber Public

    Forked from giulia-berto/app-classifyber

    Linear classification of single streamlines.

    Python 7 1

  4. tractome tractome Public

    Tractome is an interactive 3D tool for exploration and segmentation of tractography data.

    Python 6 5

  5. verifyber verifyber Public

    An extended edge convolution model for tractography

    Python 5

  6. NeuroBox NeuroBox Public

    A OwnCloud Plugin to manage data analysis on remote high performance computing infrastructure.

    2 4

Repositories

Showing 10 of 34 repositories
  • bl_app_dbb_DisSeg Public Forked from gamorosino/bl_app_dbb_DisSeg

    Deep Learning based segmentation for distorted brains

    FBK-NILab/bl_app_dbb_DisSeg’s past year of commit activity
    Python 1 1 0 0 Updated Jun 18, 2024
  • verifyber Public

    An extended edge convolution model for tractography

    FBK-NILab/verifyber’s past year of commit activity
    Python 5 0 0 0 Updated Apr 30, 2024
  • intraopmap Public

    Integrating direct brain stimulation with rsfMRI and tractography data

    FBK-NILab/intraopmap’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 28, 2023
  • app-classifyber-segmentation Public

    Code to run Classifyber as a pre-trained bundle segmentation method.

    FBK-NILab/app-classifyber-segmentation’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Dec 26, 2023
  • TractSeg-BrainLife Public Forked from MIC-DKFZ/TractSeg

    Automatic White Matter Bundle Segmentation

    FBK-NILab/TractSeg-BrainLife’s past year of commit activity
    Python 0 Apache-2.0 73 0 0 Updated Nov 6, 2023
  • tractogram_filtering Public

    Filtering out of artifactual streamlines from a tractogram with a geometric deep learning model

    FBK-NILab/tractogram_filtering’s past year of commit activity
    Jupyter Notebook 2 1 2 0 Updated May 3, 2023
  • Dataset2BIDS Public

    Tool for converting DICOM folders to a standard BIDS format dataset, with extra options for longitudinal pre-/post-surgical MRI data.

    FBK-NILab/Dataset2BIDS’s past year of commit activity
    Shell 0 0 0 0 Updated Jan 17, 2023
  • bl_app_dbb_DiceScore Public Forked from gamorosino/bl_app_dbb_DiceScore

    Tool that performs the dice score between two 3D segmentations

    FBK-NILab/bl_app_dbb_DiceScore’s past year of commit activity
    Python 0 1 0 0 Updated Jul 17, 2022
  • bl_app_dbb_ANTsCTSeg Public Forked from gamorosino/bl_app_dbb_ANTsCTSeg

    A tool that performs the antsCorticalThickness.sh script on a T1-w image using PTBP priors in order to obtain the brain tissue segmentation.

    FBK-NILab/bl_app_dbb_ANTsCTSeg’s past year of commit activity
    Shell 0 1 0 0 Updated Jul 17, 2022
  • bl_app_dbb_preproc_t1w Public

    Brainlife App for the preprocessing of T1w MRI data of Distorted Brain Benchmark

    FBK-NILab/bl_app_dbb_preproc_t1w’s past year of commit activity
    Shell 2 1 0 0 Updated Jul 17, 2022
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