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Pull requests: Clinical-Genomics/BALSAMIC

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Pull requests list

feat: add msi tn to storage
#1483 opened Oct 1, 2024 by khurrammaqbool Loading…
17 of 54 tasks
1
@khurrammaqbool
5
feat: add artefact database argument
#1481 opened Sep 30, 2024 by mathiasbio • Draft
18 of 54 tasks
2
chore: add QC criteria for lymphoma_MRD
#1479 opened Sep 20, 2024 by mathiasbio Loading…
22 of 54 tasks
Release 16
1
@mathiasbio
2
chore: update qc thresholds
#1477 opened Aug 29, 2024 by mathiasbio • Draft
16 of 54 tasks
1
feat: merge vardict and tnscope
#1475 opened Aug 23, 2024 by mathiasbio Loading…
38 of 66 tasks
Release 16
3
@mathiasbio
3
chore: Bump TIDDIT version
#1470 opened Aug 6, 2024 by ivadym Loading…
21 of 54 tasks
Release 16
1
9
feat: update cnvkit pons
#1465 opened Jul 12, 2024 by mathiasbio Loading…
34 of 72 tasks
Release 16
4
@mathiasbio
11
feat: add msi analysis for TO workflow Feature New feature
#1463 opened Jul 5, 2024 by khurrammaqbool Loading…
17 of 54 tasks
Release 17
1
@khurrammaqbool
14
feat: add tga cnvkit to gens
#1448 opened Jun 14, 2024 by mathiasbio Loading…
28 of 53 tasks
Release 16
1
@mathiasbio
37
feat: use UMIs in TGA workflow
#1434 opened May 17, 2024 by mathiasbio • Draft
16 of 52 tasks
3
placeholder PR 2,1,1 umi
#1419 opened Mar 14, 2024 by mathiasbio • Draft
16 of 52 tasks
2
add soft normal-filtered VCF
#1402 opened Feb 27, 2024 by mathiasbio • Draft
16 of 52 tasks
1
feat: deduplicate with UMIs
#1358 opened Jan 16, 2024 by mathiasbio Loading…
23 of 56 tasks
Release 16
4
@mathiasbio
104
feat: change samtools stats to run per lane
#1349 opened Jan 3, 2024 by mathiasbio • Draft
3 tasks
1
Add resort bam
#1331 opened Nov 21, 2023 by mathiasbio • Draft
3 tasks
2
fix: make cadd snv optional
#1304 opened Oct 30, 2023 by mathiasbio • Draft
3 tasks
5
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