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BioBERT #138

Merged
merged 3 commits into from
May 23, 2019
Merged

BioBERT #138

merged 3 commits into from
May 23, 2019

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JohnGiorgi
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@JohnGiorgi JohnGiorgi commented May 22, 2019

This pull request adds BioBERT v1.1 as the default BERT model in Saber.

The first time you try to load a BERT-based model, a PyTorch version of BioBERT v1.1 will be downloaded from Google Drive and saved in saber/install/path/saber/pretrained_models.

Closes

Closes #135. Closes #137.

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coveralls commented May 22, 2019

Pull Request Test Coverage Report for Build 368

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage remained the same at ?%

Totals Coverage Status
Change from base Build 364: 0.0%
Covered Lines:
Relevant Lines: 0

💛 - Coveralls

@JohnGiorgi JohnGiorgi changed the title Biobert BioBERT May 23, 2019
@JohnGiorgi JohnGiorgi self-assigned this May 23, 2019
@JohnGiorgi JohnGiorgi added enhancement New feature or request feature labels May 23, 2019
@JohnGiorgi JohnGiorgi merged commit 18b2141 into development May 23, 2019
@JohnGiorgi JohnGiorgi deleted the biobert branch May 23, 2019 12:26
@BaderLab BaderLab deleted a comment May 23, 2019
JohnGiorgi added a commit that referenced this pull request Aug 3, 2019
BioBERT

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Former-commit-id: f6fd2b2b1efd71ea00dbd75e9b5cd24752c7edf2
JohnGiorgi added a commit that referenced this pull request Aug 5, 2019
BioBERT

Former-commit-id: 6969515
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2 participants