v0.2.1

• Fixed issue with samplesheet generation for BCCDC-PHL/plasmid-screen pipeline (Issue #21)

v0.2.0

• Added support for short and hybrid analysis modes (Issue #18)

v0.1.0

• Re-factored code to add distinct pre-analysis, analysis and post-analysis phases for each pipeline (Issue #13)

v0.1.0-alpha-6

• Implemented basic QC filtering (Issue #9)

v0.1.0-alpha-5

• Fixed issue where system crashes if it encounters a sample with fewer than 100 reads (#7)

v0.1.0-alpha-4

• Add pipeline name to work directories and reports, making it easier to find and collect these files (Issue #5)
• Store analysis outputs in a sub-directory named short, long, or hybrid, depending on the type of assembly that was performed.

v0.1.0-alpha-3

• Store short-read analyses in a sub-directory named short. (In a subsequent update we will store hybrid analyses in a parallel directory named hybrid)

v0.1.0-alpha-2

Enhancements

• Added a config option to analyze runs in reverse order (Issue #1)

v0.1.0-alpha-1

• Initial alpha pre-release