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@AllenNeuralDynamics

Allen Institute for Neural Dynamics

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  1. aind-data-schema aind-data-schema Public

    A library that defines AIND data schema and validates JSON.

    Python 19 15

  2. aind-ephys-spikesort-kilosort25-full aind-ephys-spikesort-kilosort25-full Public

    CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.

    Python 11 3

  3. parallax parallax Public

    GUI control software for the Modular Insertion System (MIS)

    Python 5 1

  4. TigerASI TigerASI Public

    a lightweight python interface for ASI brand Tiger Controllers

    Python 5 2

  5. dynamic-foraging-task dynamic-foraging-task Public

    Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control

    Python 5 4

  6. exa-spim-hardware exa-spim-hardware Public

    5

Repositories

Showing 10 of 223 repositories
  • AllenNeuralDynamics/aind-watchdog-service’s past year of commit activity
    Python 2 MIT 0 19 3 Updated Aug 19, 2024
  • AllenNeuralDynamics/neuron-tracing-utils’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Aug 19, 2024
  • aind-behavior-gym Public

    Gymnasium implementation of behavioral tasks in AIND

    AllenNeuralDynamics/aind-behavior-gym’s past year of commit activity
    Jupyter Notebook 0 MIT 0 1 0 Updated Aug 19, 2024
  • Aind.Behavior.VideoEncodingBenchmarks Public

    A repository with code for benchmarking online video acquisition/encoding pipelines

    AllenNeuralDynamics/Aind.Behavior.VideoEncodingBenchmarks’s past year of commit activity
    C# 0 MIT 0 2 0 Updated Aug 19, 2024
  • aind-data-transfer-service Public

    FastAPI service to run data compression and transfer jobs on the hpc

    AllenNeuralDynamics/aind-data-transfer-service’s past year of commit activity
    Python 1 MIT 0 15 (1 issue needs help) 0 Updated Aug 19, 2024
  • view Public

    Model/View for exa-spim

    AllenNeuralDynamics/view’s past year of commit activity
    Python 2 0 14 3 Updated Aug 19, 2024
  • aind-session Public

    User-friendly tools for accessing paths, metadata and assets related to AIND sessions

    AllenNeuralDynamics/aind-session’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 19, 2024
  • dynamic-foraging-task Public

    Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control

    AllenNeuralDynamics/dynamic-foraging-task’s past year of commit activity
    Python 5 MIT 4 60 (2 issues need help) 4 Updated Aug 19, 2024
  • AllenNeuralDynamics/exaspim-control’s past year of commit activity
    Python 1 MIT 0 4 1 Updated Aug 19, 2024
  • AllenNeuralDynamics/nmcp-deploy’s past year of commit activity
    Shell 0 0 2 0 Updated Aug 19, 2024