-
Notifications
You must be signed in to change notification settings - Fork 0
/
main_graymatter.m
31 lines (26 loc) · 1.11 KB
/
main_graymatter.m
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
% Save some useful information of the graymatter mask.
% 2016-12-13 21:27:33
% SLIC: a whole brain parcellation toolbox
% Copyright (C) 2016 Jing Wang
%
% This program is free software: you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the Free Software Foundation, either version 3 of the License, or
% (at your option) any later version.
%
% This program is distributed in the hope that it will be useful,
% but WITHOUT ANY WARRANTY; without even the implied warranty of
% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
% GNU General Public License for more details.
%
% You should have received a copy of the GNU General Public License
% along with this program. If not, see <http://www.gnu.org/licenses/>.
% clear,clc;
file_mask='graymatter.nii';
nii=load_untouch_nii(file_mask);
img_gray=double(nii.img);
msk_gray=img_gray~=0;
ind_gray=find(msk_gray);
num_gray=length(ind_gray);
siz=size(msk_gray);
save('parc_graymatter.mat','msk_gray','ind_gray','num_gray','siz');