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knitr-examples.yaml
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on:
push:
branches:
- main
- master
pull_request:
branches:
- main
- master
workflow_dispatch:
inputs:
extra-packages:
description: 'extra package to install for the runs (like a dev version of one of the deps) - comma separated'
required: false
type: string
name: Check knitr examples
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.run_id }}
cancel-in-progress: true
jobs:
run-examples:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})${{ github.event.inputs.extra-packages && ' - with some extra packages'|| ''}}
strategy:
fail-fast: false
matrix:
config:
- {os: ubuntu-latest, r: 'release'}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
DISPLAY: ':99.0'
RGL_USE_NULL: TRUE
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
use-public-rspm: true
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-tinytex@v2-branch
env:
# install full prebuilt version
TINYTEX_INSTALLER: TinyTeX
- name: Is this workflow running with extra package
if: github.event.inputs.extra-packages
run: |
echo "::notice::Running with the following extra packages for pak: ${{ github.event.inputs.extra-packages }}"
shell: bash
- uses: r-lib/actions/setup-r-dependencies@v2
with:
packages: deps::.
extra-packages: >
XML,
${{ github.event.inputs.extra-packages }}
- name: Retrieve knitr-examples
# On PR, it will checkout same branch if it exists there
uses: ./.github/actions/checkout-knitr-examples
- name: Install knitr-example dev
run: install.packages(readLines("knitr-examples/R-packages"))
shell: Rscript {0}
- name: Install system dependencies
if: runner.os == 'Linux'
run: |
sudo apt-get install -y libpoppler-cpp-dev graphviz asymptote highlight coffeescript scala optipng ghostscript
- name: Install CTAN dependencies
run: |
tinytex::tlmgr_install("dvisvgm")
shell: Rscript {0}
- name: Check knitr-examples
run: |
rm knitr-examples/cache -rf
make integration
shell: bash
- uses: actions/upload-artifact@v2
if: failure()
with:
name: knitr-examples
path:
knitr-examples/[0-9][0-9][0-9]-*.*
retention-days: 7