Code of the visualization tool extracted from the BD-PATH website.
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Updated
Mar 18, 2022 - JavaScript
Code of the visualization tool extracted from the BD-PATH website.
Repository of MATLAB implemented image processing tools
Keras unet and then chromogen analysis for prostate histopathology images.
This repository is to showcase my experience in the field of medical visualization as a research assistant under the supervision of Prof. Dr. Sylvia Saalfeld.
Repository of code for deep learning approaches on WSIs, IHC, H&E, etc.
AI competition for predicting Lymph node metastasis of breast cancer
Python 3 Package for optimally sampling big images with texture-aware patchification based on SLIC superpixels. So Sleek !
A GAN approach for improving segmentation of WSI Images.
PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, and configurable parameters
A plugin for TensorBoard to show WSI images. The plugin is based on Deep Zoom Image (DZI).
Given an image of cells from a WSI, identify the mitotic figures and return a mitotic index.
Automated batch processing for tissue microscopy image data
Integrative Spatial Analysis of H&E and IHC Images Identifies Prognostic Immune Subtypes correlated with Progression Free Survival in HPV-Related Oropharyngeal Squamous Cell Carcinoma
Breast Cancer Image Classification On WSI With Spatial Correlations https://teacher.bupt.edu.cn/zhuchuang/en/index.htm
This is a viewer app that provides using to zoom and pan tools Deep Zoom Image (dzi) or Whole Slide Image (wsi) using Electron JS and OpenSeaDragon .
[ESWA 2023] Implementation of DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis
DeeperHistReg - Source Code
The code for Kernel attention transformer (KAT)
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