PipeTaxon exposes the ncbi taxonomy database as a REST API.
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Updated
Feb 15, 2023 - Python
PipeTaxon exposes the ncbi taxonomy database as a REST API.
📓 Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practices" preprint: 10.32942/osf.io/e3qnz
A mapping project between tags (annotations, labels) and domain names
CyanoSeq: A curated cyanobacterial 16S rRNA database for next-generation sequencing
UI for checklistbank.org
Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations.
INTERACTIVE DASHBOARD to explore the Belly Button Biodiversity datasetLinks to an external site., which catalogs the microbes that colonize human navels.
Supplementary code for "A revised marine fossil record of the Mediterranean before and after the Messinian Salinity Crisis". Generates summary statistics, plots, and maps.
Django web application that provides a catalogue of all living reptile species and their classification; currently there are more than 10,000 species including another 2,800 subspecies
This Python script retrieve all children organism under an ancestor in NCBI taxonomy.
The impact of transitive annotation on the training of taxonomic classifiers
Grails 3 port of NSL services
🐊 The science of classifying and naming living organisms.
Design a pseudo database to link data on organisms and data on their genomes, all operating with recursive functions in OCaml.
Add a description, image, and links to the taxonomy-database topic page so that developers can more easily learn about it.
To associate your repository with the taxonomy-database topic, visit your repo's landing page and select "manage topics."