NGSphy: phylogenomic simulation of next-generation sequencing data
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Updated
Mar 9, 2018 - Python
NGSphy: phylogenomic simulation of next-generation sequencing data
A reproducible and scalable snakemake workflow for the analysis of DNA metabarcoding experiments, with a special focus on food and feed samples.
Targeted RNA-sequencing for the quantification of measurable residual disease in acute myeloid leukemia
For simulations of targeted-sequencing experiments under a known species/gene tree distribution, extracts the reference sequences that be used for mapping.
pyAmpli: an amplicon-based variant filter pipeline for targeted enriched resequencing data
Barcode Analyzer for metabarcoding experiments
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