phewas
Here are 11 public repositories matching this topic...
hGMNet : host Genetics and Microbe interaction Networks
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Oct 23, 2019 - Python
Those are the code files for producing the PheWAS analyses in the manuscript "Phenome-Wide Association Study of Polygenic Risk Score for Alzheimer’s Disease in Electronic Health Records". Part of our analyses included sensitive genomic data. Codes to produce AD PRS were not included here.
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May 7, 2022 - R
Code necessary to conduct all data prep and analysis in the EPoCH study.
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Aug 21, 2024 - HTML
Python package for efficient genetic association analyses
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Oct 21, 2021 - Python
Scalable Implementation of generalized mixed models using GDS files in Phenome-Wide Association Studies
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Mar 30, 2023 - C++
Tools for preprocessing, QC, and preliminary analyses from raw UK BioBank data
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Aug 5, 2022 - Jupyter Notebook
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
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Aug 10, 2024 - JavaScript
metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using univariate GWAS summary statistics.
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May 27, 2021 - R
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
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Jun 15, 2024 - Julia
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