This script allows us to generate ORF for a given Protein Sequence.
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Updated
May 2, 2017 - Python
This script allows us to generate ORF for a given Protein Sequence.
Search for new PDB structures corresponding to a search term and deposited after a certain date.
This script aims at reading a given PDB file and generation dihedral angles from it.
Python script to correct misformated x, y, and z coordinates output by Q Chem simulations.
Scripts to aid protein design. Mostly parsing PDBs, fasta files, and score files.
Python program that can identify the residues interacting between chains of a complex protein.
3D vizualisation of pdb files with python
Benchmarking common tasks on proteins in various languages and packages
A script to generate a tripeptide database. At present, the amino acids of tripeptides produced are not complete
基于modeller官网脚本进行开发的序列比对脚本
This Python script for Ghidra will export a table of function names and corresponding ordinals of a DLL, when other tools fail to do so
collect statistics from the entire PDB library
Python code to automatically interact with PDBePISA web server
A script able to extract ligands from pdb structure(s) and remove them from the original structure. The ligands are identified according to the *valid* ligands found in the binding MOAD database. The ligand can be extracted as a pdb or as a xyz (coordinate) file. Other options such as converting the queried pdb to pqr are available .
Bioinformatics pipeline for parsing PED data
Convert EOM output to a full atom PDB files
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