uwseds-group-OPMxplore created by GitHub Classroom
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Updated
Dec 14, 2017 - Jupyter Notebook
uwseds-group-OPMxplore created by GitHub Classroom
A PDB Viewer Application implemented completely in JavaFX
A complicated method to download all PDB sequences for free has been explained here. Also, a youtube video has been made for easier understanding. Check out the link in ReadME. The downloaded sequences are further cleaned for modeling purposes.
Mapping Pharos Targets to PDB IDs
Various statistics on the Protein Data Bank
Modules for PDB Data parsing and Ramachandran Analysis.
This script enables users to filter through PDB archive in order to obtain simple data from each file.
基于modeller官网脚本进行开发的序列比对脚本
Fixes mmCIF protein structure files
Slideshow to talk in August 2022 at 72nd Annual Meeting of the American Crystallographic Association
A script to generate a tripeptide database. At present, the amino acids of tripeptides produced are not complete
Guia de programas e ferramentas de bioinformática e química computacional
Visualization of proteins directly from the PDB database or from a .pdb file.
Benchmarks for reading and interpreting mmCIF files
A bioinformatics pipeline to identify the best available PDB structures for all available variants for specified genes of interest
A Python script to map PDB ID + chain ID to UniProt ID.
mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data
Dump content of PDB files (program databases) in JSON, XML, SQLite3, CSV etc.
Standalone program to download PDB Symbol files for debugging without WDK
Add a description, image, and links to the pdb-database topic page so that developers can more easily learn about it.
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