Research digital microscope in Bioinformatics
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Updated
Dec 29, 2018
Research digital microscope in Bioinformatics
Convert Nikon nd2 files to tiff
Lightweight image segmentation software for biological images.
Deep learning-based single-molecule data localization and image analysis.
Structured Illumination Microscopy (SIM) Super-Resolution using Deep Learning UNet
Napari Photobleach Correction
Tools to create patches and build CSBDeep deep learning model for md-SR imaging
Code for the PeerJ paper (colocr: an R package for conducting co-localization analysis on fluorescence microscopy images)
ExtractSharpestPlane_JNH is an ImageJ/FIJI plugin to automatically extract the sharpest plane by highest SD from image stacks for large data sets.
Procesamiento de Imágenes Microsópicas
Research Repository NeuroneLab-ISASI (Italy)
Microscope image stitiching program
A convolutional neural network segmenting fission yeast microscopy images. Application of 3D-Unet on microscopy videos.
Python package for microscope image stitching, robust to image pairs taken at different focal lengths and translations
Software for tracking centroid locations of Soybean nematodes (H. Glycines) in well plates under a scanner every hour for 24 hours and plot their behavior for different drug concentrations
Measures the integral radial density of a fluorescent signal in a nucleus of any shape
converts your czi images to pngs
This repository contains software that was developed to add metadata annotations to bioimage data before importing it into OMERO
Tensorflow object detection API for single cell detection in lensfree microscopy images
napari plugin for analyzing fluorescence-labeled proteins redistribution
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