Image segmentation - general superpixel segmentation & center detection & region growing
-
Updated
Jan 4, 2022 - Python
Image segmentation - general superpixel segmentation & center detection & region growing
Our solution for ICIAR 2018 Grand Challenge
Read and write Neuroglancer datasets programmatically.
Particle tracking by solving linear assignment problem.
Utils and convenience functions for large-scale bio-image analysis.
Pure Python library for reading NIS Elements ND2 images and metadata
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
Distributed segmentation for bio-image-analysis
Label Free Prediction of Cell Painting from Brightfield Images
Global Voxel Transformer Networks (GVTNets)
A Python library for easily calculating image-quality related features from images
This project is done for the Biomedicine, Biotechnology and Public Healthcare department of the University of Cádiz. They idea is to automatize the processing of the microscopic images of their experiments related to angiogenesis.
A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.
A scalable implementation of WobblyStitcher for 3D microscopy images
Python package for microscope image stitching, robust to image pairs taken at different focal lengths and translations
Python package for image analysis of hair curvature and cross-section
Microsnoop: A generalist tool for microscopy image representation
Identification of individual grains in microscopic images
A web app that uses a custom-built Keras model to recognize and classify white blood cells from microscopic images. It can distinguish between different types of WBCs and identify artifacts and bursted cells. I created this app as a way to explore image recognition technologies and to learn how to develop Keras models from scratch.
Napari Photobleach Correction
Add a description, image, and links to the microscopy-images topic page so that developers can more easily learn about it.
To associate your repository with the microscopy-images topic, visit your repo's landing page and select "manage topics."