a python package for finding tandem repeats from genomic sequences
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Updated
Aug 7, 2024 - C
a python package for finding tandem repeats from genomic sequences
βHΞDI (Biomarker-based Heuristic Engine for Dengue Identification) is a computational tool designed for the identification of Dengue virus serotypes in wastewater next-generation sequencing data.
Python package for microsatellite genotyping from highly multiplexed amplicon sequencing data
An ultrafast tool for genome-wide survey of microsatellites and primer design
An Open Source Program that allows users to interact with a Spacecraft in a lab environment, pre-launch.
De novo repeat inference from long reads
Build benchmark for microsatellite genotyping with HGSVC assembly contigs
De novo microsatellite loci identification pipeline as used in Schröder et al. (2021)
Multi-Locus Genotypes (MLGs) are frequently used to carry out population genetics of clonal organisms. Tools to assign genotyped individuals to MLGs were integrated in some genetic software. However, these tools usually fail to appropriately deal with missing data.
User-friendly computer program for microsatellite selection and primer design revisited - Now in a Docker
R package to find samples that represent all variables
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