NGS Processing Pipelines for WGS and WES data
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Updated
Nov 11, 2019 - Python
NGS Processing Pipelines for WGS and WES data
Automated processing and haplotype inference for double-barcoded PCR amplicons
RADx-rad pipeline for metagenomic data and analysis of SARS-CoV-2 from wastewater
Distributed iterative finite element analysis with high throughput computing
Given a set of BAM files and a gene annotation BED file, calculates the Transcript Integrity Number (TIN) for each transcript.
vSNP -- validate SNPs
Sargasso disambiguates mixed-species high-throughput sequencing data.
Processing, quality control and analysis of GAM datsets
Infer metadata for your downstream analysis straight from your RNA-seq data
uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)
A toolset for handling sequencing data with unique molecular identifiers (UMIs)
Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
vSNP -- validate SNPs
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