Nextstrain build for mpox virus
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Updated
Aug 27, 2024 - Python
Nextstrain build for mpox virus
Official place for proposals and details around monkeypox virus lineage designations
BA.2.86 project with Sigal lab
Data used for analyses in "Genomic Surveillance Reveals Multiple Introductions of SARS-CoV-2 into Northern California" (Deng et al., Science, 2020) https://doi.org/10.1126/science.abb9263
Automated genomic analysis of SARS-CoV-2 sequence data
Screen plasmids for carbapenemase resistance genes, and classify using MOB Suite
Efficiently store FASTA sequences in sqlite compressed with sidecar zstd dictionary
Cluster Investigation & Virus Epidemiology Tool
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