fast5
Here are 13 public repositories matching this topic...
Dorado-basecalled reads improve old bacterial genome assembly
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Jun 1, 2024
modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data
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Apr 29, 2024 - Python
Wrapper to read fast5, slow5, blow5 and pod5 files.
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Mar 21, 2024 - Python
Rust library to support interacting with Oxford Nanopore POD5 files
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Mar 11, 2024 - Rust
Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output
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Jul 22, 2024 - Rust
Wrapper to read fast5 and pod5 files.
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Mar 6, 2024 - Python
Documentation for the https://github.com/JannesSP/read5 repository
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Mar 5, 2024 - HTML
The first work to provide a comprehensive survey of a prominent set of algorithmic improvement and hardware acceleration efforts for the entire genome analysis pipeline used for the three most prominent sequencing data, short reads (Illumina), ultra-long reads (ONT), and accurate long reads (HiFi). Described in arXiv (2022) by Alser et al. https…
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Jun 14, 2022
Synchronise Nanopore reads with a server.
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Apr 18, 2018 - Shell
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