Designed to making setting up a markerless pose estimation of user-defined features with deep learning for all animals, including humans
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Updated
Jul 19, 2019 - Python
Designed to making setting up a markerless pose estimation of user-defined features with deep learning for all animals, including humans
An alpha playground for a web-based labeling tool for DLC
Real-time tracking and behavioural reinforcement toolbox for DeepLabCut to accompany Forys, Xiao, Gupta, and Murphy (2020).
Edit DeepLabCut labels from HDF files. Save edited files in both HDF and MATLAB file formats.
Headless DeepLabCut (no GUI support)
A framework for creating analysis applications for DeepLabCut with a gui build in Qt.
GUI to run DeepLabCut on live video feed
Evaluation code for the horse-10 dataset!
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
Fully automated (rodent) limb motion analysis toolbox for behavioral analysis with bodypart coordinate data, building upon markerless pose estimation.
DLClibrary is a lightweight library supporting universal functions for the DeepLabCut ecosystem.
Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with supervised classification to achieve fast predictions of behaviors that are not predefined by users.
SDK for running DeepLabCut on a live video stream
Simple vispy-based frame-by-frame behavior annotation GUI. Also can display DeepLabCut poses within videos during annotation.
[ICCV 2023] "Rethinking pose estimation in crowds: overcoming the detection information-bottleneck and ambiguity"
Deep learning-driven multi animal tracking and pose estimation add-on for Blender
a napari plugin for labeling and refining keypoint data within DeepLabCut projects
Utilities to convert DeepLabCut (DLC), output to/from Neurodata Without Borders (NWB) format.
Toolbox for using multiple cameras from intrinsic calculations to reconstructing kinematics
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