-
Notifications
You must be signed in to change notification settings - Fork 9
/
NAMESPACE
166 lines (165 loc) · 5.2 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
# Generated by roxygen2: do not edit by hand
S3method(add_count,SingleCellExperiment)
S3method(arrange,SingleCellExperiment)
S3method(as_tibble,SingleCellExperiment)
S3method(bind_cols,SingleCellExperiment)
S3method(bind_rows,SingleCellExperiment)
S3method(count,SingleCellExperiment)
S3method(distinct,SingleCellExperiment)
S3method(extract,SingleCellExperiment)
S3method(filter,SingleCellExperiment)
S3method(full_join,SingleCellExperiment)
S3method(ggplot,SingleCellExperiment)
S3method(glimpse,tidySingleCellExperiment)
S3method(group_by,SingleCellExperiment)
S3method(group_split,SingleCellExperiment)
S3method(inner_join,SingleCellExperiment)
S3method(join_transcripts,Seurat)
S3method(join_transcripts,default)
S3method(left_join,SingleCellExperiment)
S3method(mutate,SingleCellExperiment)
S3method(nest,SingleCellExperiment)
S3method(pivot_longer,SingleCellExperiment)
S3method(plot_ly,SingleCellExperiment)
S3method(print,SingleCellExperiment)
S3method(pull,SingleCellExperiment)
S3method(rename,SingleCellExperiment)
S3method(right_join,SingleCellExperiment)
S3method(rowwise,SingleCellExperiment)
S3method(sample_frac,SingleCellExperiment)
S3method(sample_n,SingleCellExperiment)
S3method(select,SingleCellExperiment)
S3method(separate,SingleCellExperiment)
S3method(slice,SingleCellExperiment)
S3method(slice_head,SingleCellExperiment)
S3method(slice_max,SingleCellExperiment)
S3method(slice_min,SingleCellExperiment)
S3method(slice_sample,SingleCellExperiment)
S3method(slice_tail,SingleCellExperiment)
S3method(summarise,SingleCellExperiment)
S3method(summarize,SingleCellExperiment)
S3method(tbl_format_header,tidySingleCellExperiment)
S3method(tidy,SingleCellExperiment)
S3method(unite,SingleCellExperiment)
S3method(unnest,tidySingleCellExperiment_nested)
export("%>%")
export(join_transcripts)
export(tidy)
export(unnest_single_cell_experiment)
exportMethods(aggregate_cells)
exportMethods(join_features)
importFrom(Matrix,rowSums)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,metadata)
importFrom(SingleCellExperiment,cbind)
importFrom(SingleCellExperiment,reducedDims)
importFrom(SummarizedExperiment,"assays<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"rowData<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,assays)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(dplyr,add_count)
importFrom(dplyr,any_of)
importFrom(dplyr,arrange)
importFrom(dplyr,contains)
importFrom(dplyr,count)
importFrom(dplyr,distinct)
importFrom(dplyr,distinct_at)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,group_by_drop_default)
importFrom(dplyr,group_rows)
importFrom(dplyr,group_split)
importFrom(dplyr,inner_join)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,rowwise)
importFrom(dplyr,sample_frac)
importFrom(dplyr,sample_n)
importFrom(dplyr,select)
importFrom(dplyr,slice)
importFrom(dplyr,slice_head)
importFrom(dplyr,slice_max)
importFrom(dplyr,slice_min)
importFrom(dplyr,slice_sample)
importFrom(dplyr,slice_tail)
importFrom(dplyr,summarise)
importFrom(dplyr,summarize)
importFrom(dplyr,vars)
importFrom(ellipsis,check_dots_used)
importFrom(fansi,strwrap_ctl)
importFrom(ggplot2,aes)
importFrom(ggplot2,ggplot)
importFrom(lifecycle,deprecate_warn)
importFrom(magrittr,"%$%")
importFrom(magrittr,"%>%")
importFrom(magrittr,equals)
importFrom(magrittr,set_rownames)
importFrom(methods,as)
importFrom(methods,getMethod)
importFrom(methods,is)
importFrom(pillar,align)
importFrom(pillar,get_extent)
importFrom(pillar,style_subtle)
importFrom(pillar,tbl_format_header)
importFrom(pkgconfig,get_config)
importFrom(purrr,as_mapper)
importFrom(purrr,imap)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map_chr)
importFrom(purrr,reduce)
importFrom(purrr,when)
importFrom(rlang,":=")
importFrom(rlang,dots_values)
importFrom(rlang,enexpr)
importFrom(rlang,enquo)
importFrom(rlang,enquos)
importFrom(rlang,expr)
importFrom(rlang,flatten_if)
importFrom(rlang,is_spliced)
importFrom(rlang,names2)
importFrom(rlang,quo_is_null)
importFrom(rlang,quo_is_symbol)
importFrom(rlang,quo_is_symbolic)
importFrom(rlang,quo_name)
importFrom(rlang,quo_squash)
importFrom(stats,setNames)
importFrom(stringr,regex)
importFrom(stringr,str_c)
importFrom(stringr,str_detect)
importFrom(stringr,str_remove)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_subset)
importFrom(tibble,as_tibble)
importFrom(tibble,enframe)
importFrom(tibble,glimpse)
importFrom(tibble,rowid_to_column)
importFrom(tidyr,extract)
importFrom(tidyr,nest)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,separate)
importFrom(tidyr,spread)
importFrom(tidyr,unite)
importFrom(tidyr,unnest)
importFrom(tidyselect,all_of)
importFrom(tidyselect,eval_select)
importFrom(ttservice,aggregate_cells)
importFrom(ttservice,bind_cols)
importFrom(ttservice,bind_rows)
importFrom(ttservice,join_features)
importFrom(ttservice,plot_ly)
importFrom(utils,data)
importFrom(utils,packageDescription)
importFrom(utils,tail)
importFrom(vctrs,new_data_frame)