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[python] Update to _create_or_open_coll for 1.2.7 compatibility #1606

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merged 2 commits into from
Aug 18, 2023

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@johnkerl johnkerl commented Aug 17, 2023

Testing on #1592 did not cover enough cases.

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Codecov Report

Patch coverage: 100.00% and project coverage change: +25.52% 🎉

Comparison is base (d7ee2f6) 65.56% compared to head (06dda67) 91.09%.

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Additional details and impacted files
@@             Coverage Diff             @@
##             main    #1606       +/-   ##
===========================================
+ Coverage   65.56%   91.09%   +25.52%     
===========================================
  Files         109       34       -75     
  Lines        9221     2919     -6302     
===========================================
- Hits         6046     2659     -3387     
+ Misses       3175      260     -2915     
Flag Coverage Δ
python 91.09% <100.00%> (+0.75%) ⬆️
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Flags with carried forward coverage won't be shown. Click here to find out more.

Files Changed Coverage Δ
apis/python/src/tiledbsoma/io/ingest.py 85.83% <100.00%> (+1.64%) ⬆️

... and 88 files with indirect coverage changes

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[sc-33078]

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This pull request has been linked to Shortcut Story #33078: Backward compatibility for notebook workaround.

@johnkerl johnkerl changed the title [python] Update to _create_or_open_coll for 1.2.7 compatibility [WIP] [python] Update to _create_or_open_coll for 1.2.7 compatibility Aug 18, 2023
@johnkerl johnkerl marked this pull request as ready for review August 18, 2023 14:29
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This seems like it’s probably fine, but what is the motivation here?

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@thetorpedodog chatting you on Slack

@johnkerl johnkerl merged commit 384bd12 into main Aug 18, 2023
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@johnkerl johnkerl deleted the kerl/coll2 branch August 18, 2023 14:39
github-actions bot pushed a commit that referenced this pull request Aug 18, 2023
)

* [python] Update to `_create_or_open_coll` for 1.2.7 compatibility

* unit-test case
johnkerl added a commit that referenced this pull request Aug 18, 2023
) (#1619)

* [python] Update to `_create_or_open_coll` for 1.2.7 compatibility

* unit-test case

Co-authored-by: John Kerl <kerl.john.r@gmail.com>
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[sc-33078]

beroy pushed a commit that referenced this pull request Aug 23, 2023
)

* [python] Update to `_create_or_open_coll` for 1.2.7 compatibility

* unit-test case
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4 participants