Update workflows to install spatial-io python deps

single-cell-data · Oct 25, 2024 · 1a0d17a · 1a0d17a
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diff --git a/.github/workflows/python-ci-single.yml b/.github/workflows/python-ci-single.yml
@@ -104,7 +104,7 @@ jobs:
 #        key: libtiledbsoma-build-dist-${{ inputs.os }}-${{ inputs.python_version }}-${{ hashFiles('libtiledbsoma', 'scripts/bld') }}
 
     - name: Install tiledbsoma
-      run: pip -v install -e apis/python[dev] -C "--build-option=--no-tiledb-deprecated"
+      run: pip -v install -e apis/python[all] -C "--build-option=--no-tiledb-deprecated"
       env:
         CC: ${{ inputs.cc }}
         CXX: ${{ inputs.cxx }}

diff --git a/.github/workflows/r-python-interop-testing.yml b/.github/workflows/r-python-interop-testing.yml
@@ -100,7 +100,7 @@ jobs:
           cache-dependency-path: ./apis/python/setup.py
 
       - name: Install tiledbsoma
-        run: pip -v install -e apis/python[dev] -C "--build-option=--no-tiledb-deprecated "
+        run: pip -v install -e apis/python[all] -C "--build-option=--no-tiledb-deprecated "
 
       - name: Show Python package versions
         run: |