-
Notifications
You must be signed in to change notification settings - Fork 43
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
DBREF and SEQADV to go with SEQRES records #19
Comments
I added conversion of DBREF/DBREF1/DBREF2 to/from _struct_ref and _struct_ref_seq. I had a request to do this before (in the pdb->mmcif direction). And I was just experimenting with sequence alignment, so I thought it's good time to look into it. Anyway, DBREF is converted now. SEQADV not yet, so I'm leaving this issue open. |
For 2zff.cif, I think the DBREF parser and converter to PDB has a bug. Insert codes are generally a pain... The data is there though in terms of parsing them |
That was actually intentional simplification, mapping of the label and author's sequence numbers in the parts of the sequence that were missing from the model was based on guessing. |
It is great that the SEQRES records were added. Is there any change you could add the DBREF and SEQADV records as well, since these relate strongly to the SEQRES record?
_struct_ref_seq
_struct_ref_seq_dif
In particular, I'd like the conversion in the to_pdb.hpp file
The text was updated successfully, but these errors were encountered: