same trait1 inputs have different estimated number

[chenyangjjj]

Dear Oleksandr,

I am using mixer to investigate the polygenic overlap between three traits. (trait1 and trait2; trait1 and trait3).

I ran the analysis successfully, but the results is a little bit hard to explain. In two analysis, The Venn plots shows trait1 have different related variants number with same trait1 inputs. Does it make sense? Or there is any potential reason caused this.