You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I git the singularity container of mixer (https://github.com/comorment/mixer). I have installed mixer through singularity (figure shows), but when I run mix.py, the log file noted the version was still 1.2.0. Why didn't I got the update? What should I do to update to version 1.3.0?
I git the singularity container of mixer (https://github.com/comorment/mixer). I have installed mixer through singularity (figure shows), but when I run mix.py, the log file noted the version was still 1.2.0. Why didn't I got the update? What should I do to update to version 1.3.0?
![image](https://user-images.githubusercontent.com/64346329/218234482-4c6fc332-c83a-4bb2-b9d4-77149985acdc.png)
singularity shell /mixer/src/mixer.sif
python /tools/mixer/precimed/mixer.py fit1 \
--trait1-file $EPI/GrimAge_qc_noMHC.csv.gz \
--out $EPIOUT/GrimAge_qc_noMHC.fit.rep${SLURM_ARRAY_TASK_ID} \
--extract /REF/ldsc/1000G_EUR_Phase3_plink/1000G.EUR.QC.prune_maf0p05_rand2M_r2p8.rep${SLURM_ARRAY_TASK_ID}.snps \
--bim-file /REF/ldsc/1000G_EUR_Phase3_plink/1000G.EUR.QC.@.bim \
--ld-file /REF/ldsc/1000G_EUR_Phase3_plink/1000G.EUR.QC.@.run4.ld
Thank you in advance for help!
The text was updated successfully, but these errors were encountered: