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Support Snakemake --report #219

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Jun 17, 2024
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Support Snakemake --report #219

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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -260,7 +260,7 @@ RUN python3 -m venv /usr/local/libexec/awscli \
# Install Snakemake and related optional dependencies.
# Pinned to 7.32.3 for stability (2023-09-09)
# Pulp>=2.8.0 breaks snakemake <=8.1.1, see https://github.com/snakemake/snakemake/issues/2607
RUN pip3 install snakemake==7.32.3 "pulp<2.8"
RUN pip3 install snakemake[reports]==7.32.3 "pulp<2.8"
# Google Cloud Storage package is required for Snakemake to fetch remote files
# from Google Storage URIs.
RUN pip3 install google-cloud-storage==2.7.0
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