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layer file creation: fsync timeline directories using VirtualFile::sync_all() #6986

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@problame problame commented Mar 1, 2024

Except for the involvement of the VirtualFile fd cache, this is
equivalent to what happened before at runtime.

Future PR #6378 will implement VirtualFile::sync_all() using
tokio-epoll-uring if that's configured as the io engine.
This PR is preliminary work for that.

part of #6663

The `writer.finish()` methods already fsync the inode,
using `VirtualFile::sync_all()`.

All that the callers need to do is fsync their directory,
i.e., the timeline directory.

Note that there's a call in the new compaction code that
is apparently dead-at-runtime, so, I couldn't fix up
any fsyncs there [Link](https://github.com/neondatabase/neon/blob/502b69b33bbd4ad1b0647e921a9c665249a2cd62/pageserver/src/tenant/timeline/compaction.rs#L204-L211).

In the grand scheme of things, layer durability probably doesn't
matter anymore because the remote storage is authoritative at all times
as of #5198. But, let's not break the discipline in htis commit.

part of #6663
…nc_all()

Except for the involvement of the VirtualFile fd cache, this is
equivalent to what happened before at runtime.

Future PR #6378 will implement `VirtualFile::sync_all()` using
tokio-epoll-uring if that's configured as the io engine.
This PR is preliminary work for that.
As pointed out in the comments added in this PR:
the in-memory state of the filesystem already has the layer file in its final place.
If the fsync fails, but pageserver continues to execute, it's quite easy
for subsequent pageserver code to observe the file being there and
assume it's durable, where it really isn't.

It can happen that we get ENOSPC during the fsync.
However,
1. the timeline dir is small (remember, the big layer _file_ has already been synced).
   Small data means ENOSPC due to delayed allocation races etc are less likely.
2. what elase are we going to do in that case?

If we decide to bubble up the error, the file remains on disk.
We could try to unlink it and fsync after the unlink.
If that fails, we would _definitely_ need to error out.
Is it worth the trouble though?

Side note: all this logic about not carrying on after fsync failure
implies that we `sync` the filesystem successfully before we restart
the pageserver. Our systemd unit currently does not do that, but should.
…kio-epoll-uring/layer-write-path-fsync-cleanups
…sync-cleanups' into problame/integrate-tokio-epoll-uring/create-layer-fatal-err-on-fsync
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github-actions bot commented Mar 1, 2024

2484 tests run: 2361 passed, 0 failed, 123 skipped (full report)


Flaky tests (1)

Postgres 14

  • test_compute_pageserver_connection_stress: debug

Code coverage* (full report)

  • functions: 28.7% (6933 of 24172 functions)
  • lines: 47.2% (42515 of 90097 lines)

* collected from Rust tests only


The comment gets automatically updated with the latest test results
c654263 at 2024-03-04T13:20:20.883Z :recycle:

@problame problame requested a review from koivunej March 1, 2024 14:49
@problame problame marked this pull request as ready for review March 1, 2024 14:49
@problame problame requested a review from a team as a code owner March 1, 2024 14:49
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Looking good!

pageserver/src/tenant.rs Show resolved Hide resolved
…kio-epoll-uring/layer-write-path-fsync-cleanups
…sync-cleanups' into problame/integrate-tokio-epoll-uring/create-layer-fatal-err-on-fsync
…-err-on-fsync' into problame/integrate-tokio-epoll-uring/ioengine-par-fsync
Base automatically changed from problame/integrate-tokio-epoll-uring/create-layer-fatal-err-on-fsync to main March 4, 2024 12:18
@problame problame enabled auto-merge (squash) March 4, 2024 12:31
@problame problame merged commit 944cac9 into main Mar 4, 2024
53 checks passed
@problame problame deleted the problame/integrate-tokio-epoll-uring/ioengine-par-fsync branch March 4, 2024 13:31
problame added a commit that referenced this pull request Mar 5, 2024
part of #6663 
See that epic for more context & related commits.

Problem
-------

Before this PR, the layer-file-creating code paths were using
VirtualFile, but under the hood these were still blocking system calls.

Generally this meant we'd stall the executor thread, unless the caller
"knew" and used the following pattern instead:

```
spawn_blocking(|| {
    Handle::block_on(async {
        VirtualFile::....().await;
    })
}).await
```

Solution
--------

This PR adopts `tokio-epoll-uring` on the layer-file-creating code paths
in pageserver.

Note that on-demand downloads still use `tokio::fs`, these will be
converted in a future PR.

Design: Avoiding Regressions With `std-fs` 
------------------------------------------

If we make the VirtualFile write path truly async using
`tokio-epoll-uring`, should we then remove the `spawn_blocking` +
`Handle::block_on` usage upstack in the same commit?

No, because if we’re still using the `std-fs` io engine, we’d then block
the executor in those places where previously we were protecting us from
that through the `spawn_blocking` .

So, if we want to see benefits from `tokio-epoll-uring` on the write
path while also preserving the ability to switch between
`tokio-epoll-uring` and `std-fs` , where `std-fs` will behave identical
to what we have now, we need to ***conditionally* use `spawn_blocking +
Handle::block_on`** .

I.e., in the places where we use that know, we’ll need to make that
conditional based on the currently configured io engine.

It boils down to investigating all the places where we do
`spawn_blocking(... block_on(... VirtualFile::...))`.

Detailed [write-up of that investigation in
Notion](https://neondatabase.notion.site/Surveying-VirtualFile-write-path-usage-wrt-tokio-epoll-uring-integration-spawn_blocking-Handle-bl-5dc2270dbb764db7b2e60803f375e015?pvs=4
), made publicly accessible.

tl;dr: Preceding PRs addressed the relevant call sites:
- `metadata` file: turns out we could simply remove it (#6777, #6769,
#6775)
- `create_delta_layer()`: made sensitive to `virtual_file_io_engine` in
#6986

NB: once we are switched over to `tokio-epoll-uring` everywhere in
production, we can deprecate `std-fs`; to keep macOS support, we can use
`tokio::fs` instead. That will remove this whole headache.


Code Changes In This PR
-----------------------

- VirtualFile API changes
  - `VirtualFile::write_at`
- implement an `ioengine` operation and switch `VirtualFile::write_at`
to it
  - `VirtualFile::metadata()`
- curiously, we only use it from the layer writers' `finish()` methods
- introduce a wrapper `Metadata` enum because `std::fs::Metadata` cannot
be constructed by code outside rust std
- `VirtualFile::sync_all()` and for completeness sake, add
`VirtualFile::sync_data()`

Testing & Rollout
-----------------

Before merging this PR, we ran the CI with both io engines.

Additionally, the changes will soak in staging.

We could have a feature gate / add a new io engine
`tokio-epoll-uring-write-path` to do a gradual rollout. However, that's
not part of this PR.


Future Work
-----------

There's still some use of `std::fs` and/or `tokio::fs` for directory
namespace operations, e.g. `std::fs::rename`.

We're not addressing those in this PR, as we'll need to add the support
in tokio-epoll-uring first. Note that rename itself is usually fast if
the directory is in the kernel dentry cache, and only the fsync after
rename is slow. These fsyncs are using tokio-epoll-uring, so, the impact
should be small.
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