update photoC related diagnostics

new zint_100m diagnostics change default output frequencies to meet CMIP6 tier 1 and 2 requests
marbl-ecosys · Feb 26, 2018 · e7deac5 · e7deac5
1 parent 43678eb
commit e7deac5
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Showing 3 changed files with 134 additions and 61 deletions.
diff --git a/autogenerated_src/default_diagnostics.json b/autogenerated_src/default_diagnostics.json
@@ -1872,63 +1872,90 @@
       "vertical_grid": "none"
    },
    "photoC_((autotroph_sname))": {
-      "frequency": "medium",
+      "frequency": "never",
       "longname": "((autotroph_lname)) C Fixation",
       "operator": "average",
       "truncate": true,
       "units": "mmol/m^3/s",
       "vertical_grid": "layer_avg"
    },
    "photoC_((autotroph_sname))_zint": {
-      "frequency": "high",
+      "frequency": [
+         "medium",
+         "high"
+      ],
       "longname": "((autotroph_lname)) C Fixation Vertical Integral",
+      "operator": [
+         "average",
+         "average"
+      ],
+      "units": "mmol/m^3 cm/s",
+      "vertical_grid": "none"
+   },
+   "photoC_((autotroph_sname))_zint_100m": {
+      "frequency": "medium",
+      "longname": "((autotroph_lname)) C Fixation Vertical Integral, 0-100m",
       "operator": "average",
       "units": "mmol/m^3 cm/s",
       "vertical_grid": "none"
    },
    "photoC_NO3_((autotroph_sname))": {
-      "frequency": "medium",
+      "frequency": "never",
       "longname": "((autotroph_lname)) C Fixation from NO3",
       "operator": "average",
       "truncate": true,
       "units": "mmol/m^3/s",
       "vertical_grid": "layer_avg"
    },
    "photoC_NO3_((autotroph_sname))_zint": {
-      "frequency": "medium",
+      "frequency": "never",
       "longname": "((autotroph_lname)) C Fixation from NO3 Vertical Integral",
       "operator": "average",
       "units": "mmol/m^3 cm/s",
       "vertical_grid": "none"
    },
    "photoC_NO3_TOT": {
-      "frequency": "never",
+      "frequency": "medium",
       "longname": "Total C Fixation from NO3",
       "operator": "average",
       "units": "mmol/m^3/s",
       "vertical_grid": "layer_avg"
    },
    "photoC_NO3_TOT_zint": {
-      "frequency": "never",
+      "frequency": "medium",
       "longname": "Total C Fixation from NO3 Vertical Integral",
       "operator": "average",
       "units": "mmol/m^3 cm/s",
       "vertical_grid": "none"
    },
+   "photoC_NO3_TOT_zint_100m": {
+      "frequency": "medium",
+      "longname": "Total C Fixation from NO3 Vertical Integral, 0-100m",
+      "operator": "average",
+      "units": "mmol/m^3 cm/s",
+      "vertical_grid": "none"
+   },
    "photoC_TOT": {
-      "frequency": "never",
+      "frequency": "medium",
       "longname": "Total C Fixation",
       "operator": "average",
       "units": "mmol/m^3/s",
       "vertical_grid": "layer_avg"
    },
    "photoC_TOT_zint": {
-      "frequency": "never",
+      "frequency": "medium",
       "longname": "Total C Fixation Vertical Integral",
       "operator": "average",
       "units": "mmol/m^3 cm/s",
       "vertical_grid": "none"
    },
+   "photoC_TOT_zint_100m": {
+      "frequency": "medium",
+      "longname": "Total C Fixation Vertical Integral, 0-100m",
+      "operator": "average",
+      "units": "mmol/m^3 cm/s",
+      "vertical_grid": "none"
+   },
    "photoFe_((autotroph_sname))": {
       "frequency": "medium",
       "longname": "((autotroph_lname)) Fe Uptake",

diff --git a/src/default_diagnostics.yaml b/src/default_diagnostics.yaml
@@ -354,13 +354,25 @@ photoC_TOT_zint :
    longname : Total C Fixation Vertical Integral
    units : mmol/m^3 cm/s
    vertical_grid : none
-   frequency : never
+   frequency : medium
+   operator : average
+photoC_TOT_zint_100m :
+   longname : Total C Fixation Vertical Integral, 0-100m
+   units : mmol/m^3 cm/s
+   vertical_grid : none
+   frequency : medium
    operator : average
 photoC_NO3_TOT_zint :
    longname : Total C Fixation from NO3 Vertical Integral
    units : mmol/m^3 cm/s
    vertical_grid : none
-   frequency : never
+   frequency : medium
+   operator : average
+photoC_NO3_TOT_zint_100m :
+   longname : Total C Fixation from NO3 Vertical Integral, 0-100m
+   units : mmol/m^3 cm/s
+   vertical_grid : none
+   frequency : medium
    operator : average
 Jint_Ctot :
    longname : Vertical Integral of Conservative Subterms of Source Sink Term for Ctot
@@ -604,13 +616,13 @@ photoC_TOT :
    longname : Total C Fixation
    units : mmol/m^3/s
    vertical_grid : layer_avg
-   frequency : never
+   frequency : medium
    operator : average
 photoC_NO3_TOT :
    longname : Total C Fixation from NO3
    units : mmol/m^3/s
    vertical_grid : layer_avg
-   frequency : never
+   frequency : medium
    operator : average
 DOC_prod :
    longname : DOC Production
@@ -1190,13 +1202,23 @@ photoC_((autotroph_sname))_zint :
    longname : ((autotroph_lname)) C Fixation Vertical Integral
    units : mmol/m^3 cm/s
    vertical_grid : none
-   frequency : high
+   frequency :
+      - medium
+      - high
+   operator :
+      - average
+      - average
+photoC_((autotroph_sname))_zint_100m :
+   longname : ((autotroph_lname)) C Fixation Vertical Integral, 0-100m
+   units : mmol/m^3 cm/s
+   vertical_grid : none
+   frequency : medium
    operator : average
 photoC_NO3_((autotroph_sname))_zint :
    longname : ((autotroph_lname)) C Fixation from NO3 Vertical Integral
    units : mmol/m^3 cm/s
    vertical_grid : none
-   frequency : medium
+   frequency : never
    operator : average
 graze_((autotroph_sname))_zint :
    longname : ((autotroph_lname)) Grazing Vertical Integral
@@ -1346,14 +1368,14 @@ photoC_((autotroph_sname)) :
    units : mmol/m^3/s
    vertical_grid : layer_avg
    truncate : true
-   frequency : medium
+   frequency : never
    operator : average
 photoC_NO3_((autotroph_sname)) :
    longname : ((autotroph_lname)) C Fixation from NO3
    units : mmol/m^3/s
    vertical_grid : layer_avg
    truncate : true
-   frequency : medium
+   frequency : never
    operator : average
 photoFe_((autotroph_sname)) :
    longname : ((autotroph_lname)) Fe Uptake