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Please don’t be shy and raise issues if something in the instructions is unclear. You’d be really helping me, I want to make the setup as straightforward as possible!

TOC

Few notes

I understand that people who’d like to use this may not be super familiar with Python, pip or generally unix, so here are some useful notes:

  • only python >= 3.7 is supported
  • I’m using pip3 command, but on your system you might only have pip.

    If your pip --version says python 3, feel free to use pip.

  • If you have issues getting pip or pip3 to work, it may be worth invoking the module instead using a fully qualified path, like python3 -m pip (e.g. python3 -m pip install --user ..)
  • similarly, I’m using python3 in the documentation, but if your python --version says python3, it’s okay to use python
  • when you are using pip install, always pass --user, and never install third party packages with sudo (unless you know what you are doing)
  • throughout the guide I’m assuming the user config directory is ~/.config, but it’s different on Mac/Windows.

    See this if you’re not sure what’s your user config dir.

Install main HPI package

This is a required step

You can choose one of the following options:

option 1: install from PIP

This is the easiest way:

pip3 install --user HPI

option 2: local/editable install

This is convenient if you’re planning to add new modules or change the existing ones.

  1. Clone the repository: git clone git@github.com:karlicoss/HPI.git /path/to/hpi
  2. Go into the project directory: cd /path/to/hpi
  3. Run pip3 install --user -e .

    This will install the package in ‘editable mode’. It means that any changes to /path/to/hpi will be immediately reflected without need to reinstall anything.

    It’s extremely convenient for developing and debugging.

option 3: use without installing

This is less convenient, but gives you more control.

  1. Clone the repository: git clone git@github.com:karlicoss/HPI.git /path/to/hpi
  2. Go into the project directory: cd /path/to/hpi
  3. Install the dependencies: python3 setup.py --dependencies-only
  4. Use with_my script to get access to my. modules.

    For example:

    /path/to/hpi/with_my python3 -c 'from my.pinboard import bookmarks; print(list(bookmarks()))'
        

    It’s also convenient to put a symlink to with_my somewhere in your system path so you can run it from anywhere, or add an alias in your bashrc:

    alias with_my='/path/to/hpi/with_my'
        

    After that, you can wrap your command in with_my to give it access to my. modules, e.g. see examples.

The benefit of this way is that you get a bit more control, explicitly allowing your scripts to use your data.

appendix: optional packages

You can also install some optional packages

pip3 install 'HPI[optional]'

They aren’t necessary, but will improve your experience. At the moment these are:

Setting up modules

This is an optional step as few modules work without extra setup. But it depends on the specific module.

See MODULES to read documentation on specific modules that interest you.

You might also find interesting to read CONFIGURING, where I’m elaborating on some technical rationales behind the current configuration system.

private configuration (my.config)

If you’re not planning to use private configuration (some modules don’t need it) you can skip straight to the next step. Still, I’d recommend you to read anyway.

The configuration usually contains paths to the data on your disk, and some modules have extra settings. The config is simply a python package (named my.config), expected to be in ~/.config/my. If you’d like to change the location of the my.config directory, you can set the MY_CONFIG environment variable. e.g. in your .bashrc add: export MY_CONFIG=$HOME/.my/

Since it’s a Python package, generally it’s very flexible and there are many ways to set it up.

  • The simplest way

    After installing HPI, run hpi config create.

    This will create an empty config file for you (usually, in ~/.config/my), which you can edit. Example configuration:

    import pytz # yes, you can use any Python stuff in the config
    
    class emfit:
        export_path = '/data/exports/emfit'
        tz = pytz.timezone('Europe/London')
        excluded_sids = []
        cache_path  = '/tmp/emfit.cache'
    
    class instapaper:
        export_path = '/data/exports/instapaper'
    
    class roamresearch:
        export_path = '/data/exports/roamresearch'
        username    = 'karlicoss'
        

    To find out which attributes you need to specify:

    • check in MODULES
    • check in the default config stubs
    • if there is nothing there, the easiest is perhaps to skim through the module’s code and search for config. uses.

      For example, if you search for config. in emfit module, you’ll see that it’s using export_path, tz, excluded_sids and cache_path.

    • or you can just try running them and fill in the attributes Python complains about!

      or run hpi doctor my.modulename

module dependencies

Dependencies are different for specific modules you’re planning to use, so it’s hard to tell in advance what you’ll need.

First thing you should try is just using the module; if it works – great! If it doesn’t (i.e. you get something like ImportError):

  • try using hpi module install modulename (where <modulename> is something like my.hypothesis, etc.)

    This command uses REQUIRES declaration to install the dependencies.

  • otherwise manually install missing packages via pip3 install --user

    Also please feel free to report if the command above didn’t install some dependencies!

Troubleshooting

HPI comes with a command line tool that can help you detect potential issues. Run:

hpi doctor
# alternatively, for more output:
hpi doctor --verbose

If you only have a few modules set up, lots of them will error for you, which is expected, so check the ones you expect to work.

If you’re having issues with cachew or want to show logs to troubleshoot what may be happening, you can pass the debug flag (e.g., hpi --debug doctor my.module_name) or set the LOGGING_LEVEL_HPI environment variable (e.g., LOGGING_LEVEL_HPI=debug hpi query my.module_name) to print all logs, including the cachew dependencies. LOGGING_LEVEL_HPI could also be used to silence info logs, like LOGGING_LEVEL_HPI=warning hpi ...

If you want to enable logs for a particular module, you can use the LOGGING_LEVEL_ prefix and then the module name with underscores, like LOGGING_LEVEL_my_hypothesis=debug hpi query my.hypothesis

If you want HPI to autocomplete the module names for you, this comes with shell completion, see misc/completion

If you have any ideas on how to improve it, please let me know!

Here’s a screenshot how it looks when everything is mostly good: link.

If you experience issues, feel free to report, but please attach your:

  • OS version
  • python version: python3 --version
  • HPI version: pip3 show HPI
  • if you see some exception, attach a full log (just make sure there is not private information in it)
  • if you think it can help, attach screenshots

common issues

  • run hpi config check, it help to spot certain errors Also really recommended to install mypy first, it really helps to spot various trivial errors
  • if hpi shows you something like ‘command not found’, try using python3 -m my.core instead This likely means that your $HOME/.local/bin directory isn’t in your $PATH

Usage examples

End-to-end Roam Research setup

In this post you can trace all steps:

  • learn how to export your raw data
  • integrate it with HPI package
  • benefit from HPI integration

If you want to set up a new data source, it could be a good learning reference.

Polar

Polar doesn’t require any setup as it accesses the highlights on your filesystem (usually in ~/.polar).

You can try if it works with:

python3 -c 'import my.polar as polar; print(polar.get_entries())'

Google Takeout

If you have zip Google Takeout archives, you can use HPI to access it:

  • prepare the config ~/.config/my/my/config.py
    class google:
        # you can pass the directory, a glob, or a single zip file
        takeout_path = '/backups/takeouts/*.zip'
        
  • use it:
    $ python3 -c 'import my.media.youtube as yt; print(yt.get_watched()[-1])'
    Watched(url='https://www.youtube.com/watch?v=p0t0J_ERzHM', title='Monster magnet meets monster magnet...', when=datetime.datetime(2020, 1, 22, 20, 34, tzinfo=<UTC>))
        

Kobo reader

Kobo module allows you to access the books you’ve read along with the highlights and notes. It uses exports provided by kobuddy package.

  • prepare the config
    1. Install kobuddy from PIP
    2. Add kobo config to ~/.config/my/my/config.py
      class kobo:
          export_dir = '/backups/to/kobo/'
              

After that you should be able to use it:

python3 -c 'import my.books.kobo as kobo; print(kobo.get_highlights())'

Orger

You can use orger to get Org-mode representations of your data.

Some examples (assuming you’ve installed Orger):

Orger + Polar

This will mirror Polar highlights as org-mode:

orger/modules/polar.py --to polar.org

demo.py

read/run demo.py for a full demonstration of setting up Hypothesis (uses annotations data from a public Github repository)

Data flow

Here, I’ll demonstrate how data flows into and from HPI on several examples, starting from the simplest to more complicated.

If you want to see how it looks as a whole, check out my infrastructure map!

Polar Bookshelf

Polar keeps the data:

  • locally, on your disk
  • in ~/.polar,
  • as a bunch of JSON files

It’s excellent from all perspectives, except one – you can only use meaningfully use it through Polar app. However, you might want to integrate your data elsewhere and use it in ways that Polar developers never even anticipated!

If you check the data layout (example), you can see it’s messy: scattered across multiple directories, contains raw HTML, obscure entities, etc. It’s understandable from the app developer’s perspective, but it makes things frustrating when you want to work with this data.

Here comes the HPI polar module!

|💾 ~/.polar (raw JSON data) |
            ⇓⇓⇓
   HPI (my.polar)
            ⇓⇓⇓
   < python interface >

So the data is read from the |💾 filesystem |, processed/normalized with HPI, which results in a nice programmatic < interface > for Polar data.

Note that it doesn’t require any extra configuration – it “just” works because the data is kept locally in the known location.

Google Takeout

Google Takeout exports are, unfortunately, manual (or semi-manual if you do some voodoo with mounting Google Drive). Anyway, say you’re doing it once in six months, so you end up with a several archives on your disk:

/backups/takeout/takeout-20151201.zip
....
/backups/takeout/takeout-20190901.zip
/backups/takeout/takeout-20200301.zip

Inside the archives…. there is a bunch of random files from all your google services. Lately, many of them are JSONs, but for example, in 2015 most of it was in HTMLs! It’s a nightmare to work with, even when you’re an experienced programmer.

Of course, HPI helps you here by encapsulating all this parsing logic and exposing Python interfaces instead.

      < 🌐  Google |
             ⇓⇓⇓
    { manual download }
             ⇓⇓⇓
 |💾 /backups/takeout/*.zip |
             ⇓⇓⇓
   HPI (my.google.takeout)
             ⇓⇓⇓
    < python interface >

The only thing you need to do is to tell it where to find the files on your disk, via the config, because different people use different paths for backups.

Reddit

Reddit has a proper API, so in theory HPI could talk directly to Reddit and retrieve the latest data. But that’s not what it doing!

  • first, there are excellent programmatic APIs for Reddit out there already, for example, praw
  • more importantly, this is the design decision of HPI

    It doesn’t deal with all with the complexities of API interactions. Instead, it relies on other tools to put intermediate, raw data, on your disk and then transforms this data into something nice.

As an example, for Reddit, HPI is relying on data fetched by rexport library. So the pipeline looks like:

      < 🌐  Reddit |
             ⇓⇓⇓
    { rexport/export.py (automatic, e.g. cron) }
             ⇓⇓⇓
 |💾 /backups/reddit/*.json |
             ⇓⇓⇓
     HPI (my.reddit.rexport)
             ⇓⇓⇓
    < python interface >

So, in your reddit config, similarly to Takeout, you need export_path, so HPI knows how to find your Reddit data on the disk.

But there is an extra caveat: rexport is already coming with nice data bindings to parse its outputs.

Several other HPI modules are following a similar pattern: hypothesis, instapaper, pinboard, kobo, etc.

Since the reddit API has limited results, you can use my.reddit.pushshift to access older reddit comments, which both then get merged into my.reddit.all.comments

Twitter

Twitter is interesting, because it’s an example of an HPI module that arbitrates between several data sources from the same service.

The reason to use multiple in case of Twitter is:

  • there is official Twitter Archive, but it’s manual, takes several days to complete and hard to automate.
  • there is twint, which can get real-time Twitter data via scraping

    But Twitter has a limitation and you can’t get data past 3200 tweets through API or scraping.

So the idea is to export both data sources on your disk:

                             < 🌐  Twitter |
                             ⇓⇓            ⇓⇓
    { manual archive download }           { twint (automatic, cron) }
             ⇓⇓⇓                                   ⇓⇓⇓
 |💾 /backups/twitter-archives/*.zip |     |💾 /backups/twint/db.sqlite |
                                .............

What we do next is:

  1. Process raw data from twitter archives (manual export, but has all the data)
  2. Process raw data from twint database (automatic export, but only recent data)
  3. Merge them together, overlaying twint data on top of twitter archive data
                                .............
 |💾 /backups/twitter-archives/*.zip |     |💾 /backups/twint/db.sqlite |
             ⇓⇓⇓                                   ⇓⇓⇓
     HPI (my.twitter.archive)              HPI (my.twitter.twint)
      ⇓                     ⇓              ⇓                    ⇓
      ⇓                   HPI (my.twitter.all)                  ⇓
      ⇓                           ⇓⇓                            ⇓
< python interface>       < python interface>          < python interface>

For merging the data, we’re using a tiny auxiliary module, my.twitter.all (It’s just 20 lines of code, check it out).

Since you have two different sources of raw data, you need to specify two bits of config:

class twint:
    export_path = '/backups/twint/db.sqlite'
class twitter_archive:
    export_path = '/backups/twitter-archives/*.zip'

Note that you can also just use my.twitter.archive or my.twitter.twint directly, or set either of paths to empty string: =”=

Connecting to other apps

As a user you might not be so interested in Python interface per se.. but a nice thing about having one is that it’s easy to connect the data with other apps and libraries!

                         /---- 💻promnesia --- | browser extension  >
| python interface > ----+---- 💻orger     --- |💾 org-mode mirror  |
                         +-----💻memacs    --- |💾 org-mode lifelog |
                         +-----💻????      --- | REST api           >
                         +-----💻????      --- | Datasette          >
                         \-----💻????      --- | Memex              >

See more in “How do you use it?” section.

Also check out my personal infrastructure map to see where I’m using HPI.

Adding/modifying modules

  • The easiest is just to clone HPI repository and run an editable PIP install (pip3 install --user -e .), or via with_my wrapper.

    After that you can just edit the code directly, your changes will be reflected immediately, and you will be able to quickly iterate/fix bugs/add new methods.

    This is great if you just want to add a few of your own personal modules, or make minimal changes to a few files. If you do much more than that, you may run into possible merge conflicts if/when you update (git pull) HPI

  • The “proper way” (unless you want to contribute to the upstream) is to create a separate file hierarchy and add your module to PYTHONPATH.

    See MODULE_DESIGN/adding modules for more information