Generating our data files

[ocaisa]

In https://carpentries-incubator.github.io/hpc-workflows/09-cluster/index.html#running-our-workflow-on-the-cluster , it is introduced how to send your workflow to the cluster.

In our case, we probably want to introduce this earlier, and also highlight https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html#local-rules . For example, we only really want to submit the amdahl jobs to the cluster, everything else is very cheap and we can keep it local.