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Incorrect results with MPS #435

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constantinpape opened this issue Mar 13, 2024 · 6 comments
Open

Incorrect results with MPS #435

constantinpape opened this issue Mar 13, 2024 · 6 comments

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@constantinpape
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@Marei33 observed incorrect results when using MPS results (including failing tests) when using the MPS backend.
This happened with two torch / torchvision settings:

  • pytorch = 2.0.1; torchvision: 0.15.2
  • pytorch=2.2.1 und torchvision=0.17.1

For some reason this is not picked up by our tests that run on MAC-Latest

@Marei33: what chipset does your Mac have? M1, M2 or M3?

@GenevieveBuckley: could you check if this still works on your MAC (you can just run test/test_prompt_based_segmentation.py).

@Marei33
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Marei33 commented Mar 13, 2024

@constantinpape My Mac has the M3 chip or more specifically it's M3 Max. I also just checked that on my private Macbook with the M1 chip. There I get the same errors.

@constantinpape
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My Mac has the M3 chip or more specifically it's M3 Max. I also just checked that on my private Macbook with the M1 chip. There I get the same errors.

Thanks for checking. And this inconsistency with our tests in the CLI is weird...

@GenevieveBuckley
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I don't see a test error when I run pytest test/test_prompt_based_segmentation.py on the dev branch. Do you have any details about what kind of error @Marei33 saw?

I'm using:

  • M1 Mac, Sonoma 14.2.1 (23C71)
  • pytorch 2.2.0 and torchvision 0.17.0
Details of pytest output (click to expand)

conda activate micro-sam-dev
cd Documents/GitHub/micro-sam
git checkout dev
git pull upstream dev

pytest test/test_prompt_based_segmentation.py
============================= test session starts ==============================
platform darwin -- Python 3.11.7, pytest-8.1.1, pluggy-1.4.0 -- /Users/genevieb/mambaforge/envs/micro-sam-dev/bin/python3.11
cachedir: .pytest_cache
rootdir: /Users/genevieb/Documents/GitHub/micro-sam
configfile: pyproject.toml
plugins: cov-4.1.0, napari-plugin-engine-0.2.0, npe2-0.7.4, napari-0.4.19
collected 7 items

test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box PASSED [ 14%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_and_points PASSED [ 28%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_tiled PASSED [ 42%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask PASSED [ 57%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask_non_square PASSED [ 71%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points PASSED [ 85%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points_tiled PASSED [100%]

---------- coverage: platform darwin, python 3.11.7-final-0 ----------
Name                                                     Stmts   Miss  Cover   Missing
--------------------------------------------------------------------------------------
micro_sam/__init__.py                                        3      0   100%
micro_sam/__version__.py                                     1      0   100%
micro_sam/_test_util.py                                     11     11     0%   1-22
micro_sam/_vendored.py                                      85     85     0%   9-150
micro_sam/evaluation/__init__.py                             4      4     0%   4-17
micro_sam/evaluation/evaluation.py                          32     32     0%   5-75
micro_sam/evaluation/experiments.py                         28     28     0%   4-83
micro_sam/evaluation/inference.py                          235    235     0%   4-618
micro_sam/evaluation/instance_segmentation.py              140    140     0%   4-393
micro_sam/evaluation/livecell.py                           173    173     0%   5-417
micro_sam/evaluation/model_comparison.py                   236    236     0%   4-444
micro_sam/evaluation/multi_dimensional_segmentation.py      80     80     0%   1-269
micro_sam/inference.py                                      69     69     0%   1-173
micro_sam/instance_segmentation.py                         410    410     0%   7-1012
micro_sam/multi_dimensional_segmentation.py                128    128     0%   4-304
micro_sam/precompute_state.py                              103    103     0%   4-264
micro_sam/prompt_based_segmentation.py                     212     56    74%   52-56, 70-73, 103-105, 137-138, 146-147, 180-182, 209-219, 240-241, 317, 369-380, 386-388, 404, 415, 418, 461, 496-502, 517, 520
micro_sam/prompt_generators.py                             129    129     0%   6-350
micro_sam/sam_annotator/__init__.py                          4      4     0%   4-7
micro_sam/sam_annotator/_annotator.py                       73     73     0%   1-160
micro_sam/sam_annotator/_state.py                           88     88     0%   6-175
micro_sam/sam_annotator/_widgets.py                        368    368     0%   4-797
micro_sam/sam_annotator/annotator_2d.py                     44     44     0%   1-122
micro_sam/sam_annotator/annotator_3d.py                     76     76     0%   1-170
micro_sam/sam_annotator/annotator_tracking.py              106    106     0%   1-274
micro_sam/sam_annotator/gui_utils.py                        41     41     0%   1-75
micro_sam/sam_annotator/image_series_annotator.py          124    124     0%   1-309
micro_sam/sam_annotator/util.py                            303    303     0%   1-602
micro_sam/sample_data.py                                   145    145     0%   15-378
micro_sam/training/__init__.py                               3      3     0%   4-6
micro_sam/training/joint_sam_trainer.py                    127    127     0%   1-202
micro_sam/training/sam_trainer.py                          221    221     0%   1-447
micro_sam/training/trainable_sam.py                         44     44     0%   1-128
micro_sam/training/util.py                                 107    107     0%   1-236
micro_sam/util.py                                          373    227    39%   31-33, 38-39, 43-44, 66-68, 155, 158, 166, 187-188, 191-195, 201-209, 268-270, 276, 278, 288, 298-302, 327-355, 372-380, 384-386, 398-401, 404-407, 412-440, 444-488, 514-525, 533, 539-561, 565-609, 664, 667, 678, 684-689, 712, 714, 720, 767-780, 798-805, 821-844, 859-867
micro_sam/visualization.py                                  92     92     0%   4-169
--------------------------------------------------------------------------------------
TOTAL                                                     4418   4112     7%
Coverage XML written to file coverage.xml


============================= slowest 10 durations =============================
1.72s setup    test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box
0.84s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask_non_square
0.42s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask
0.31s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points_tiled
0.23s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box
0.16s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_and_points
0.09s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points
0.06s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_tiled

(2 durations < 0.005s hidden.  Use -vv to show these durations.)
============================== 7 passed in 7.58s ==============================

Details `conda list` (click to expand)

conda list
# packages in environment at /Users/genevieb/mambaforge/envs/micro-sam-dev:
#
# Name                    Version                   Build  Channel
absl-py                   2.1.0              pyhd8ed1ab_0    conda-forge
affogato                  0.3.3           py311h9e438b8_3    conda-forge
aiohttp                   3.9.3           py311h05b510d_0    conda-forge
aiosignal                 1.3.1              pyhd8ed1ab_0    conda-forge
alabaster                 0.7.16             pyhd8ed1ab_0    conda-forge
aom                       3.8.1                h078ce10_0    conda-forge
app-model                 0.2.4              pyhd8ed1ab_0    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
appnope                   0.1.4              pyhd8ed1ab_0    conda-forge
asciitree                 0.3.3                      py_2    conda-forge
asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.38.0               hcb7b3dd_1    conda-forge
attrs                     23.2.0             pyh71513ae_0    conda-forge
babel                     2.14.0             pyhd8ed1ab_0    conda-forge
bioimageio.core           0.5.11             pyhd8ed1ab_0    conda-forge
bioimageio.spec           0.4.9.post5        pyhd8ed1ab_0    conda-forge
blinker                   1.7.0              pyhd8ed1ab_0    conda-forge
blosc                     1.21.5               hc338f07_0    conda-forge
brotli                    1.1.0                hb547adb_1    conda-forge
brotli-bin                1.1.0                hb547adb_1    conda-forge
brotli-python             1.1.0           py311ha891d26_1    conda-forge
brunsli                   0.1                  h9f76cd9_0    conda-forge
bzip2                     1.0.8                h93a5062_5    conda-forge
c-ares                    1.26.0               h93a5062_0    conda-forge
c-blosc2                  2.13.2               ha57e6be_0    conda-forge
ca-certificates           2024.2.2             hf0a4a13_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                5.3.2              pyhd8ed1ab_0    conda-forge
cachey                    0.2.1              pyh9f0ad1d_0    conda-forge
cairo                     1.18.0               hd1e100b_0    conda-forge
certifi                   2024.2.2           pyhd8ed1ab_0    conda-forge
cffi                      1.16.0          py311h4a08483_0    conda-forge
charls                    2.4.2                h13dd4ca_0    conda-forge
charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
click                     8.1.7           unix_pyh707e725_0    conda-forge
cloudpickle               3.0.0              pyhd8ed1ab_0    conda-forge
coin-or-cbc               2.10.10              hfaca913_0    conda-forge
coin-or-cgl               0.60.7               hf050ae7_0    conda-forge
coin-or-clp               1.17.8               h65c2c7c_0    conda-forge
coin-or-osi               0.108.8              h19bcb3e_0    conda-forge
coin-or-utils             2.11.9               h12587b1_0    conda-forge
coincbc                   2.10.10           0_metapackage    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
coloredlogs               15.0.1             pyhd8ed1ab_3    conda-forge
comm                      0.2.1              pyhd8ed1ab_0    conda-forge
contourpy                 1.2.0           py311hd03642b_0    conda-forge
coverage                  7.4.4                    pypi_0    pypi
cryptography              42.0.2          py311h08c85a6_0    conda-forge
cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
cython                    3.0.8           py311h92babd0_0    conda-forge
cytoolz                   0.12.3          py311h05b510d_0    conda-forge
dask-core                 2024.2.0           pyhd8ed1ab_0    conda-forge
dav1d                     1.2.1                hb547adb_0    conda-forge
debugpy                   1.8.1           py311h92babd0_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
docstring_parser          0.15               pyhd8ed1ab_0    conda-forge
docutils                  0.17.1          py311h267d04e_4    conda-forge
et_xmlfile                1.1.0              pyhd8ed1ab_0    conda-forge
exceptiongroup            1.2.0              pyhd8ed1ab_2    conda-forge
executing                 2.0.1              pyhd8ed1ab_0    conda-forge
expat                     2.5.0                hb7217d7_1    conda-forge
fasteners                 0.17.3             pyhd8ed1ab_0    conda-forge
ffmpeg                    6.1.1           gpl_h31ea89b_104    conda-forge
fftw                      3.3.10          nompi_h3046061_108    conda-forge
filelock                  3.13.1             pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 h77eed37_1    conda-forge
fontconfig                2.14.2               h82840c6_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.48.1          py311h05b510d_0    conda-forge
freetype                  2.12.1               hadb7bae_2    conda-forge
freetype-py               2.4.0              pyhd8ed1ab_0    conda-forge
fribidi                   1.0.10               h27ca646_0    conda-forge
frozenlist                1.4.1           py311h05b510d_0    conda-forge
fsspec                    2024.2.0           pyhca7485f_0    conda-forge
gdk-pixbuf                2.42.10              h15fa40c_4    conda-forge
gettext                   0.21.1               h0186832_0    conda-forge
giflib                    5.2.1                h1a8c8d9_3    conda-forge
glib                      2.78.3               h9e231a4_0    conda-forge
glib-tools                2.78.3               h9e231a4_0    conda-forge
glpk                      5.0                  h6d7a090_0    conda-forge
gmp                       6.3.0                h965bd2d_0    conda-forge
gmpy2                     2.1.2           py311h2ba9262_1    conda-forge
gnutls                    3.7.9                hd26332c_0    conda-forge
google-auth               2.27.0             pyhca7485f_0    conda-forge
google-auth-oauthlib      1.2.0              pyhd8ed1ab_0    conda-forge
graphite2                 1.3.13            h9f76cd9_1001    conda-forge
graphviz                  9.0.0                h3face73_1    conda-forge
grpcio                    1.60.0          py311hf5d242d_1    conda-forge
gst-plugins-base          1.22.9               h09b4b5e_0    conda-forge
gstreamer                 1.22.9               h551c6ff_0    conda-forge
gtk2                      2.24.33              h7895bb2_3    conda-forge
gts                       0.7.6                he42f4ea_4    conda-forge
h5py                      3.10.0          nompi_py311hd00467f_101    conda-forge
harfbuzz                  8.3.0                h8f0ba13_0    conda-forge
hdf5                      1.14.3          nompi_h5bb55e9_100    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
hsluv                     5.0.4              pyhd8ed1ab_0    conda-forge
huggingface_hub           0.20.2             pyhd8ed1ab_0    conda-forge
humanfriendly             10.0               pyhd8ed1ab_6    conda-forge
icu                       73.2                 hc8870d7_0    conda-forge
idna                      3.6                pyhd8ed1ab_0    conda-forge
imagecodecs               2024.1.1        py311h788c98d_0    conda-forge
imageio                   2.33.1             pyh8c1a49c_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
imath                     3.1.10               h1059232_0    conda-forge
importlib-metadata        7.0.1              pyha770c72_0    conda-forge
importlib_metadata        7.0.1                hd8ed1ab_0    conda-forge
importlib_resources       6.1.1              pyhd8ed1ab_0    conda-forge
in-n-out                  0.1.9              pyhd8ed1ab_0    conda-forge
iniconfig                 2.0.0                    pypi_0    pypi
ipykernel                 6.29.2             pyh3cd1d5f_0    conda-forge
ipython                   8.21.0             pyh707e725_0    conda-forge
jasper                    4.2.0                h7c0e182_0    conda-forge
jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.3              pyhd8ed1ab_0    conda-forge
joblib                    1.3.2              pyhd8ed1ab_0    conda-forge
jsonschema                4.21.1             pyhd8ed1ab_0    conda-forge
jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
jupyter_client            8.6.0              pyhd8ed1ab_0    conda-forge
jupyter_core              5.7.1           py311h267d04e_0    conda-forge
jxrlib                    1.1                  h93a5062_3    conda-forge
kiwisolver                1.4.5           py311he4fd1f5_1    conda-forge
kornia                    0.7.0              pyhd8ed1ab_0    conda-forge
krb5                      1.21.2               h92f50d5_0    conda-forge
lame                      3.100             h1a8c8d9_1003    conda-forge
lazy_loader               0.3                pyhd8ed1ab_0    conda-forge
lcms2                     2.16                 ha0e7c42_0    conda-forge
lemon                     1.3.1                h7e262df_8    conda-forge
lerc                      4.0.0                h9a09cb3_0    conda-forge
libabseil                 20230802.1      cxx17_h13dd4ca_0    conda-forge
libaec                    1.1.2                h13dd4ca_1    conda-forge
libass                    0.17.1               hf7da4fe_1    conda-forge
libavif16                 1.0.4                h76840f6_0    conda-forge
libblas                   3.9.0           21_osxarm64_openblas    conda-forge
libboost                  1.82.0               h489e689_6    conda-forge
libboost-python           1.82.0          py311hcab0526_6    conda-forge
libbrotlicommon           1.1.0                hb547adb_1    conda-forge
libbrotlidec              1.1.0                hb547adb_1    conda-forge
libbrotlienc              1.1.0                hb547adb_1    conda-forge
libcblas                  3.9.0           21_osxarm64_openblas    conda-forge
libclang                  15.0.7          default_hd209bcb_4    conda-forge
libclang13                15.0.7          default_ha49e599_4    conda-forge
libcurl                   8.5.0                h2d989ff_0    conda-forge
libcxx                    16.0.6               h4653b0c_0    conda-forge
libdeflate                1.19                 hb547adb_0    conda-forge
libedit                   3.1.20191231         hc8eb9b7_2    conda-forge
libev                     4.33                 h93a5062_2    conda-forge
libexpat                  2.5.0                hb7217d7_1    conda-forge
libffi                    3.4.2                h3422bc3_5    conda-forge
libgd                     2.3.3                hfdf3952_9    conda-forge
libgfortran               5.0.0           13_2_0_hd922786_3    conda-forge
libgfortran5              13.2.0               hf226fd6_3    conda-forge
libglib                   2.78.3               hb438215_0    conda-forge
libgrpc                   1.60.0               hfc68871_1    conda-forge
libhwloc                  2.9.3           default_h4394839_1009    conda-forge
libiconv                  1.17                 h0d3ecfb_2    conda-forge
libidn2                   2.3.7                h93a5062_0    conda-forge
libjpeg-turbo             3.0.0                hb547adb_1    conda-forge
liblapack                 3.9.0           21_osxarm64_openblas    conda-forge
liblapacke                3.9.0           21_osxarm64_openblas    conda-forge
libllvm14                 14.0.6               hd1a9a77_4    conda-forge
libllvm15                 15.0.7               h2621b3d_4    conda-forge
libnghttp2                1.58.0               ha4dd798_1    conda-forge
libogg                    1.3.4                h27ca646_1    conda-forge
libopenblas               0.3.26          openmp_h6c19121_0    conda-forge
libopencv                 4.9.0           py311hdccf81a_7    conda-forge
libopenvino               2023.3.0             he6dadac_0    conda-forge
libopenvino-arm-cpu-plugin 2023.3.0             he6dadac_0    conda-forge
libopenvino-auto-batch-plugin 2023.3.0             hc9f00d9_0    conda-forge
libopenvino-auto-plugin   2023.3.0             hc9f00d9_0    conda-forge
libopenvino-hetero-plugin 2023.3.0             hf483cef_0    conda-forge
libopenvino-ir-frontend   2023.3.0             hf483cef_0    conda-forge
libopenvino-onnx-frontend 2023.3.0             h98f6304_0    conda-forge
libopenvino-paddle-frontend 2023.3.0             h98f6304_0    conda-forge
libopenvino-pytorch-frontend 2023.3.0             hebf3989_0    conda-forge
libopenvino-tensorflow-frontend 2023.3.0             hb5ee477_0    conda-forge
libopenvino-tensorflow-lite-frontend 2023.3.0             hebf3989_0    conda-forge
libopus                   1.3.1                h27ca646_1    conda-forge
libpng                    1.6.42               h091b4b1_0    conda-forge
libpq                     16.2                 h0f8b458_0    conda-forge
libprotobuf               4.25.1               h810fc01_1    conda-forge
libre2-11                 2023.06.02           h1753957_0    conda-forge
librsvg                   2.56.3               h55a2576_1    conda-forge
libsodium                 1.0.18               h27ca646_1    conda-forge
libsqlite                 3.45.1               h091b4b1_0    conda-forge
libssh2                   1.11.0               h7a5bd25_0    conda-forge
libtasn1                  4.19.0               h1a8c8d9_0    conda-forge
libtiff                   4.6.0                ha8a6c65_2    conda-forge
libunistring              0.9.10               h3422bc3_0    conda-forge
libvorbis                 1.3.7                h9f76cd9_0    conda-forge
libvpx                    1.13.1               hb765f3a_0    conda-forge
libwebp                   1.3.2                hf30222e_1    conda-forge
libwebp-base              1.3.2                hb547adb_0    conda-forge
libxcb                    1.15                 hf346824_0    conda-forge
libxml2                   2.12.5               h0d0cfa8_0    conda-forge
libzlib                   1.2.13               h53f4e23_5    conda-forge
libzopfli                 1.0.3                h9f76cd9_0    conda-forge
llvm-openmp               17.0.6               hcd81f8e_0    conda-forge
llvmlite                  0.42.0          py311hf5d242d_1    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lz4-c                     1.9.4                hb7217d7_0    conda-forge
magicgui                  0.8.1              pyhd8ed1ab_0    conda-forge
markdown                  3.5.2              pyhd8ed1ab_0    conda-forge
markdown-it-py            3.0.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.5           py311h05b510d_0    conda-forge
marshmallow               3.20.2             pyhd8ed1ab_0    conda-forge
marshmallow-jsonschema    0.13.0             pyhd8ed1ab_0    conda-forge
marshmallow-union         0.1.15.post1       pyhd8ed1ab_0    conda-forge
matplotlib-base           3.8.2           py311hfdba5f6_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.2              pyhd8ed1ab_0    conda-forge
micro-sam                 0.4.0                    pypi_0    pypi
mobile-sam                1.0                      pypi_0    pypi
mpc                       1.3.1                h91ba8db_0    conda-forge
mpfr                      4.2.1                h9546428_0    conda-forge
mpmath                    1.3.0              pyhd8ed1ab_0    conda-forge
mrcfile                   1.5.0              pyhd8ed1ab_0    conda-forge
msgpack-python            1.0.7           py311hd03642b_0    conda-forge
multidict                 6.0.5           py311he2be06e_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
mypy_extensions           1.0.0              pyha770c72_0    conda-forge
mysql-common              8.0.33               hf9e6398_6    conda-forge
mysql-libs                8.0.33               he3dca8b_6    conda-forge
napari                    0.4.19             pyh9208f05_0    conda-forge
napari-console            0.0.9              pyh9208f05_0    conda-forge
napari-plugin-engine      0.2.0              pyhd8ed1ab_2    conda-forge
napari-svg                0.1.10             pyhd8ed1ab_0    conda-forge
ncurses                   6.4                  h463b476_2    conda-forge
nest-asyncio              1.6.0              pyhd8ed1ab_0    conda-forge
nettle                    3.9.1                h40ed0f5_0    conda-forge
networkx                  3.2.1              pyhd8ed1ab_0    conda-forge
nifty                     1.2.1           py311h78cd012_4    conda-forge
npe2                      0.7.4              pyhd8ed1ab_0    conda-forge
nspr                      4.35                 hb7217d7_0    conda-forge
nss                       3.97                 h5ce2875_0    conda-forge
numba                     0.59.0          py311h00351ea_1    conda-forge
numcodecs                 0.12.1          py311hbaf5611_0    conda-forge
numpy                     1.26.4          py311h7125741_0    conda-forge
numpydoc                  1.5.0              pyhd8ed1ab_0    conda-forge
oauthlib                  3.2.2              pyhd8ed1ab_0    conda-forge
onnx                      1.15.0          py311hfcc1abf_1    conda-forge
onnxruntime               1.17.0          py311hde53a5b_1_cpu    conda-forge
opencv                    4.9.0           py311h404381a_7    conda-forge
openexr                   3.2.1                h73dd21e_1    conda-forge
openh264                  2.4.1                hebf3989_0    conda-forge
openjpeg                  2.5.0                h4c1507b_3    conda-forge
openpyxl                  3.1.2           py311heffc1b2_0    conda-forge
openssl                   3.2.1                h0d3ecfb_0    conda-forge
p11-kit                   0.24.1               h29577a5_0    conda-forge
packaging                 23.2               pyhd8ed1ab_0    conda-forge
pandas                    2.2.0           py311hfbe21a1_0    conda-forge
pango                     1.50.14              hcf40dda_2    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.4.1              pyhd8ed1ab_0    conda-forge
pcre2                     10.42                h26f9a81_0    conda-forge
pexpect                   4.9.0              pyhd8ed1ab_0    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    10.2.0          py311hb9c5795_0    conda-forge
pint                      0.23               pyhd8ed1ab_0    conda-forge
pip                       24.0               pyhd8ed1ab_0    conda-forge
pixman                    0.43.2               hebf3989_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_1    conda-forge
platformdirs              4.2.0              pyhd8ed1ab_0    conda-forge
pluggy                    1.4.0                    pypi_0    pypi
ply                       3.11                       py_1    conda-forge
pooch                     1.8.0              pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.42             pyha770c72_0    conda-forge
protobuf                  4.25.1          py311he791500_0    conda-forge
psutil                    5.9.8           py311h05b510d_0    conda-forge
psygnal                   0.9.5              pyhd8ed1ab_0    conda-forge
pthread-stubs             0.4               h27ca646_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pugixml                   1.14                 h13dd4ca_0    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
py-opencv                 4.9.0           py311he78c7fc_7    conda-forge
pyasn1                    0.5.1              pyhd8ed1ab_0    conda-forge
pyasn1-modules            0.3.0              pyhd8ed1ab_0    conda-forge
pycocotools               2.0.6           py311h4add359_1    conda-forge
pyconify                  0.1.6              pyhd8ed1ab_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pydantic                  1.10.13         py311h05b510d_1    conda-forge
pydantic-compat           0.1.1              pyhd8ed1ab_0    conda-forge
pygments                  2.17.2             pyhd8ed1ab_0    conda-forge
pyjwt                     2.8.0              pyhd8ed1ab_1    conda-forge
pyopengl                  3.1.6              pyhd8ed1ab_1    conda-forge
pyopenssl                 24.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.1.1              pyhd8ed1ab_0    conda-forge
pyproject_hooks           1.0.0              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.9          py311hc49b008_5    conda-forge
pyqt5-sip                 12.12.2         py311ha891d26_5    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
pytest                    8.1.1                    pypi_0    pypi
pytest-cov                4.1.0                    pypi_0    pypi
python                    3.11.7          hdf0ec26_1_cpython    conda-forge
python-build              1.0.3              pyhd8ed1ab_0    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-elf                0.5.0              pyhd8ed1ab_0    conda-forge
python-flatbuffers        23.5.26            pyhd8ed1ab_0    conda-forge
python-stdnum             1.19               pyhd8ed1ab_0    conda-forge
python-tzdata             2023.4             pyhd8ed1ab_0    conda-forge
python-xxhash             3.4.1           py311heffc1b2_0    conda-forge
python_abi                3.11                    4_cp311    conda-forge
pytorch                   2.2.0                  py3.11_0    pytorch
pytz                      2024.1             pyhd8ed1ab_0    conda-forge
pyu2f                     0.1.5              pyhd8ed1ab_0    conda-forge
pywavelets                1.4.1           py311hb49d859_1    conda-forge
pyyaml                    6.0.1           py311heffc1b2_1    conda-forge
pyzmq                     25.1.2          py311h6727e71_0    conda-forge
qt-main                   5.15.8              h0a21348_18    conda-forge
qtconsole-base            5.5.1              pyha770c72_0    conda-forge
qtpy                      2.4.1              pyhd8ed1ab_0    conda-forge
rav1e                     0.6.6                h69fbcac_2    conda-forge
re2                       2023.06.02           h6135d0a_0    conda-forge
readline                  8.2                  h92ec313_1    conda-forge
referencing               0.33.0             pyhd8ed1ab_0    conda-forge
requests                  2.31.0             pyhd8ed1ab_0    conda-forge
requests-oauthlib         1.3.1              pyhd8ed1ab_0    conda-forge
rich                      13.7.0             pyhd8ed1ab_0    conda-forge
rpds-py                   0.17.1          py311h94f323b_0    conda-forge
rsa                       4.9                pyhd8ed1ab_0    conda-forge
ruamel.yaml               0.18.6          py311h05b510d_0    conda-forge
ruamel.yaml.clib          0.2.8           py311h05b510d_0    conda-forge
safetensors               0.4.2           py311h94f323b_0    conda-forge
scikit-image              0.22.0          py311h6e08293_2    conda-forge
scikit-learn              1.4.0           py311h696fe38_0    conda-forge
scipy                     1.12.0          py311h4f9446f_2    conda-forge
segment-anything          1.0                pyhd8ed1ab_1    conda-forge
setuptools                69.0.3             pyhd8ed1ab_0    conda-forge
shellingham               1.5.4              pyhd8ed1ab_0    conda-forge
sip                       6.8.3           py311h92babd0_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
skan                      0.11.1             pyhd8ed1ab_0    conda-forge
snappy                    1.1.10               h17c5cce_0    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
sphinx                    4.5.0              pyh6c4a22f_0    conda-forge
sphinxcontrib-applehelp   1.0.4              pyhd8ed1ab_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    2.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.5              pyhd8ed1ab_2    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
superqt                   0.6.1              pyh9208f05_0    conda-forge
svt-av1                   1.8.0                h463b476_0    conda-forge
sympy                     1.12            pypyh9d50eac_103    conda-forge
tbb                       2021.11.0            h2ffa867_1    conda-forge
tensorboard               2.15.2             pyhd8ed1ab_0    conda-forge
tensorboard-data-server   0.7.0           py311h5fb2c35_1    conda-forge
threadpoolctl             3.2.0              pyha21a80b_0    conda-forge
tifffile                  2024.1.30          pyhd8ed1ab_0    conda-forge
timm                      0.9.12             pyhd8ed1ab_0    conda-forge
tk                        8.6.13               h5083fa2_1    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tomli-w                   1.0.0              pyhd8ed1ab_0    conda-forge
toolz                     0.12.1             pyhd8ed1ab_0    conda-forge
torch_em                  0.6.1              pyhd8ed1ab_0    conda-forge
torchvision               0.17.0                py311_cpu    pytorch
tornado                   6.3.3           py311heffc1b2_1    conda-forge
tqdm                      4.66.2             pyhd8ed1ab_0    conda-forge
traitlets                 5.14.1             pyhd8ed1ab_0    conda-forge
typer                     0.9.0              pyhd8ed1ab_0    conda-forge
typing-extensions         4.9.0                hd8ed1ab_0    conda-forge
typing_extensions         4.9.0              pyha770c72_0    conda-forge
tzdata                    2024a                h0c530f3_0    conda-forge
urllib3                   2.2.0              pyhd8ed1ab_0    conda-forge
vigra                     1.11.2          py311hb7482d5_4    conda-forge
vispy                     0.14.1          py311h80bfdd0_0    conda-forge
wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
werkzeug                  3.0.1              pyhd8ed1ab_0    conda-forge
wheel                     0.42.0             pyhd8ed1ab_0    conda-forge
wrapt                     1.16.0          py311h05b510d_0    conda-forge
x264                      1!164.3095           h57fd34a_2    conda-forge
x265                      3.5                  hbc6ce65_3    conda-forge
xarray                    2024.1.1           pyhd8ed1ab_0    conda-forge
xorg-libxau               1.0.11               hb547adb_0    conda-forge
xorg-libxdmcp             1.1.3                h27ca646_0    conda-forge
xxhash                    0.8.2                hb547adb_0    conda-forge
xz                        5.2.6                h57fd34a_0    conda-forge
yaml                      0.2.5                h3422bc3_2    conda-forge
yarl                      1.9.4           py311h05b510d_0    conda-forge
z5py                      2.0.17          py311h4b05729_0    conda-forge
zarr                      2.16.1             pyhd8ed1ab_0    conda-forge
zeromq                    4.3.5                h965bd2d_0    conda-forge
zfp                       1.0.1                ha8f4885_0    conda-forge
zipp                      3.17.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h53f4e23_5    conda-forge
zlib-ng                   2.0.7                h1a8c8d9_0    conda-forge
zstd                      1.5.5                h4f39d0f_0    conda-forge

@GenevieveBuckley
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Re-reading, it seems you want to know what happens for those specific versions of pytorch and torchvision. Here are those results, but I still don't see any errors and it doesn't seem any different than before.

  • M1 Mac, Sonoma 14.2.1 (23C71)
  • pytorch=2.2.1 und torchvision=0.17.1
Details of pytest output

cd Documents/GitHub/micro-sam
git checkout dev
git pull upstream dev

pytest test/test_prompt_based_segmentation.py
============================= test session starts ==============================
platform darwin -- Python 3.11.7, pytest-8.1.1, pluggy-1.4.0 -- /Users/genevieb/mambaforge/envs/micro-sam-dev-pytorch221-torchvision0171/bin/python3.11
cachedir: .pytest_cache
PyQt5 5.15.9 -- Qt runtime 5.15.8 -- Qt compiled 5.15.8
rootdir: /Users/genevieb/Documents/GitHub/micro-sam
configfile: pyproject.toml
plugins: qt-4.4.0, cov-4.1.0, napari-plugin-engine-0.2.0, npe2-0.7.4, napari-0.4.19
collected 7 items

test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box PASSED [ 14%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_and_points PASSED [ 28%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_tiled PASSED [ 42%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask PASSED [ 57%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask_non_square PASSED [ 71%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points PASSED [ 85%]
test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points_tiled PASSED [100%]

---------- coverage: platform darwin, python 3.11.7-final-0 ----------
Name                                                     Stmts   Miss  Cover   Missing
--------------------------------------------------------------------------------------
micro_sam/__init__.py                                        3      0   100%
micro_sam/__version__.py                                     1      0   100%
micro_sam/_test_util.py                                     11     11     0%   1-22
micro_sam/_vendored.py                                      85     85     0%   9-150
micro_sam/evaluation/__init__.py                             4      4     0%   4-17
micro_sam/evaluation/evaluation.py                          32     32     0%   5-75
micro_sam/evaluation/experiments.py                         28     28     0%   4-83
micro_sam/evaluation/inference.py                          235    235     0%   4-618
micro_sam/evaluation/instance_segmentation.py              140    140     0%   4-393
micro_sam/evaluation/livecell.py                           173    173     0%   5-417
micro_sam/evaluation/model_comparison.py                   236    236     0%   4-444
micro_sam/evaluation/multi_dimensional_segmentation.py      80     80     0%   1-269
micro_sam/inference.py                                      69     69     0%   1-173
micro_sam/instance_segmentation.py                         410    410     0%   7-1012
micro_sam/multi_dimensional_segmentation.py                128    128     0%   4-304
micro_sam/precompute_state.py                              103    103     0%   4-264
micro_sam/prompt_based_segmentation.py                     212     56    74%   52-56, 70-73, 103-105, 137-138, 146-147, 180-182, 209-219, 240-241, 317, 369-380, 386-388, 404, 415, 418, 461, 496-502, 517, 520
micro_sam/prompt_generators.py                             129    129     0%   6-350
micro_sam/sam_annotator/__init__.py                          4      4     0%   4-7
micro_sam/sam_annotator/_annotator.py                       73     73     0%   1-160
micro_sam/sam_annotator/_state.py                           88     88     0%   6-175
micro_sam/sam_annotator/_widgets.py                        368    368     0%   4-797
micro_sam/sam_annotator/annotator_2d.py                     44     44     0%   1-122
micro_sam/sam_annotator/annotator_3d.py                     76     76     0%   1-170
micro_sam/sam_annotator/annotator_tracking.py              106    106     0%   1-274
micro_sam/sam_annotator/gui_utils.py                        41     41     0%   1-75
micro_sam/sam_annotator/image_series_annotator.py          124    124     0%   1-309
micro_sam/sam_annotator/util.py                            303    303     0%   1-602
micro_sam/sample_data.py                                   145    145     0%   15-378
micro_sam/training/__init__.py                               3      3     0%   4-6
micro_sam/training/joint_sam_trainer.py                    127    127     0%   1-202
micro_sam/training/sam_trainer.py                          221    221     0%   1-447
micro_sam/training/trainable_sam.py                         44     44     0%   1-128
micro_sam/training/util.py                                 107    107     0%   1-236
micro_sam/util.py                                          373    227    39%   31-33, 38-39, 43-44, 66-68, 155, 158, 166, 187-188, 191-195, 201-209, 268-270, 276, 278, 288, 298-302, 327-355, 372-380, 384-386, 398-401, 404-407, 412-440, 444-488, 514-525, 533, 539-561, 565-609, 664, 667, 678, 684-689, 712, 714, 720, 767-780, 798-805, 821-844, 859-867
micro_sam/visualization.py                                  92     92     0%   4-169
--------------------------------------------------------------------------------------
TOTAL                                                     4418   4112     7%
Coverage XML written to file coverage.xml


============================= slowest 10 durations =============================
2.30s setup    test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box
0.83s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask_non_square
0.43s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_mask
0.33s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points_tiled
0.24s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box
0.21s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_and_points
0.10s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_points
0.07s call     test/test_prompt_based_segmentation.py::TestPromptBasedSegmentation::test_segment_from_box_tiled

(2 durations < 0.005s hidden.  Use -vv to show these durations.)
============================== 7 passed in 43.75s =============================

Details of conda environment

conda list

# packages in environment at /Users/genevieb/mambaforge/envs/micro-sam-dev-pytorch221-torchvision0171:
#
# Name                    Version                   Build  Channel
absl-py                   2.1.0              pyhd8ed1ab_0    conda-forge
affogato                  0.3.3           py311h9e438b8_3    conda-forge
aiohttp                   3.9.3           py311h05b510d_0    conda-forge
aiosignal                 1.3.1              pyhd8ed1ab_0    conda-forge
alabaster                 0.7.16             pyhd8ed1ab_0    conda-forge
aom                       3.8.1                h078ce10_0    conda-forge
app-model                 0.2.4              pyhd8ed1ab_0    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
appnope                   0.1.4              pyhd8ed1ab_0    conda-forge
asciitree                 0.3.3                      py_2    conda-forge
asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.38.0               hcb7b3dd_1    conda-forge
attrs                     23.2.0             pyh71513ae_0    conda-forge
babel                     2.14.0             pyhd8ed1ab_0    conda-forge
bioimageio.core           0.5.11             pyhd8ed1ab_0    conda-forge
bioimageio.spec           0.4.9.post5        pyhd8ed1ab_0    conda-forge
blinker                   1.7.0              pyhd8ed1ab_0    conda-forge
blosc                     1.21.5               hc338f07_0    conda-forge
brotli                    1.1.0                hb547adb_1    conda-forge
brotli-bin                1.1.0                hb547adb_1    conda-forge
brotli-python             1.1.0           py311ha891d26_1    conda-forge
brunsli                   0.1                  h9f76cd9_0    conda-forge
bzip2                     1.0.8                h93a5062_5    conda-forge
c-ares                    1.26.0               h93a5062_0    conda-forge
c-blosc2                  2.13.2               ha57e6be_0    conda-forge
ca-certificates           2024.2.2             hf0a4a13_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                5.3.2              pyhd8ed1ab_0    conda-forge
cachey                    0.2.1              pyh9f0ad1d_0    conda-forge
cairo                     1.18.0               hd1e100b_0    conda-forge
certifi                   2024.2.2           pyhd8ed1ab_0    conda-forge
cffi                      1.16.0          py311h4a08483_0    conda-forge
charls                    2.4.2                h13dd4ca_0    conda-forge
charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
click                     8.1.7           unix_pyh707e725_0    conda-forge
cloudpickle               3.0.0              pyhd8ed1ab_0    conda-forge
coin-or-cbc               2.10.10              hfaca913_0    conda-forge
coin-or-cgl               0.60.7               hf050ae7_0    conda-forge
coin-or-clp               1.17.8               h65c2c7c_0    conda-forge
coin-or-osi               0.108.8              h19bcb3e_0    conda-forge
coin-or-utils             2.11.9               h12587b1_0    conda-forge
coincbc                   2.10.10           0_metapackage    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
coloredlogs               15.0.1             pyhd8ed1ab_3    conda-forge
comm                      0.2.1              pyhd8ed1ab_0    conda-forge
contourpy                 1.2.0           py311hd03642b_0    conda-forge
coverage                  7.4.4                    pypi_0    pypi
cryptography              42.0.2          py311h08c85a6_0    conda-forge
cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
cython                    3.0.8           py311h92babd0_0    conda-forge
cytoolz                   0.12.3          py311h05b510d_0    conda-forge
dask-core                 2024.2.0           pyhd8ed1ab_0    conda-forge
dav1d                     1.2.1                hb547adb_0    conda-forge
debugpy                   1.8.1           py311h92babd0_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
docstring_parser          0.15               pyhd8ed1ab_0    conda-forge
docutils                  0.17.1          py311h267d04e_4    conda-forge
et_xmlfile                1.1.0              pyhd8ed1ab_0    conda-forge
exceptiongroup            1.2.0              pyhd8ed1ab_2    conda-forge
executing                 2.0.1              pyhd8ed1ab_0    conda-forge
expat                     2.5.0                hb7217d7_1    conda-forge
fasteners                 0.17.3             pyhd8ed1ab_0    conda-forge
ffmpeg                    6.1.1           gpl_h31ea89b_104    conda-forge
fftw                      3.3.10          nompi_h3046061_108    conda-forge
filelock                  3.13.1             pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 h77eed37_1    conda-forge
fontconfig                2.14.2               h82840c6_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.48.1          py311h05b510d_0    conda-forge
freetype                  2.12.1               hadb7bae_2    conda-forge
freetype-py               2.4.0              pyhd8ed1ab_0    conda-forge
fribidi                   1.0.10               h27ca646_0    conda-forge
frozenlist                1.4.1           py311h05b510d_0    conda-forge
fsspec                    2024.2.0           pyhca7485f_0    conda-forge
gdk-pixbuf                2.42.10              h15fa40c_4    conda-forge
gettext                   0.21.1               h0186832_0    conda-forge
giflib                    5.2.1                h1a8c8d9_3    conda-forge
glib                      2.78.3               h9e231a4_0    conda-forge
glib-tools                2.78.3               h9e231a4_0    conda-forge
glpk                      5.0                  h6d7a090_0    conda-forge
gmp                       6.3.0                h965bd2d_0    conda-forge
gmpy2                     2.1.2           py311h2ba9262_1    conda-forge
gnutls                    3.7.9                hd26332c_0    conda-forge
google-auth               2.27.0             pyhca7485f_0    conda-forge
google-auth-oauthlib      1.2.0              pyhd8ed1ab_0    conda-forge
graphite2                 1.3.13            h9f76cd9_1001    conda-forge
graphviz                  9.0.0                h3face73_1    conda-forge
grpcio                    1.60.0          py311hf5d242d_1    conda-forge
gst-plugins-base          1.22.9               h09b4b5e_0    conda-forge
gstreamer                 1.22.9               h551c6ff_0    conda-forge
gtk2                      2.24.33              h7895bb2_3    conda-forge
gts                       0.7.6                he42f4ea_4    conda-forge
h5py                      3.10.0          nompi_py311hd00467f_101    conda-forge
harfbuzz                  8.3.0                h8f0ba13_0    conda-forge
hdf5                      1.14.3          nompi_h5bb55e9_100    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
hsluv                     5.0.4              pyhd8ed1ab_0    conda-forge
huggingface_hub           0.20.2             pyhd8ed1ab_0    conda-forge
humanfriendly             10.0               pyhd8ed1ab_6    conda-forge
icu                       73.2                 hc8870d7_0    conda-forge
idna                      3.6                pyhd8ed1ab_0    conda-forge
imagecodecs               2024.1.1        py311h788c98d_0    conda-forge
imageio                   2.33.1             pyh8c1a49c_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
imath                     3.1.10               h1059232_0    conda-forge
importlib-metadata        7.0.1              pyha770c72_0    conda-forge
importlib_metadata        7.0.1                hd8ed1ab_0    conda-forge
importlib_resources       6.1.1              pyhd8ed1ab_0    conda-forge
in-n-out                  0.1.9              pyhd8ed1ab_0    conda-forge
iniconfig                 2.0.0              pyhd8ed1ab_0    conda-forge
ipykernel                 6.29.2             pyh3cd1d5f_0    conda-forge
ipython                   8.21.0             pyh707e725_0    conda-forge
jasper                    4.2.0                h7c0e182_0    conda-forge
jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.3              pyhd8ed1ab_0    conda-forge
joblib                    1.3.2              pyhd8ed1ab_0    conda-forge
jsonschema                4.21.1             pyhd8ed1ab_0    conda-forge
jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
jupyter_client            8.6.0              pyhd8ed1ab_0    conda-forge
jupyter_core              5.7.1           py311h267d04e_0    conda-forge
jxrlib                    1.1                  h93a5062_3    conda-forge
kiwisolver                1.4.5           py311he4fd1f5_1    conda-forge
kornia                    0.7.0              pyhd8ed1ab_0    conda-forge
krb5                      1.21.2               h92f50d5_0    conda-forge
lame                      3.100             h1a8c8d9_1003    conda-forge
lazy_loader               0.3                pyhd8ed1ab_0    conda-forge
lcms2                     2.16                 ha0e7c42_0    conda-forge
lemon                     1.3.1                h7e262df_8    conda-forge
lerc                      4.0.0                h9a09cb3_0    conda-forge
libabseil                 20230802.1      cxx17_h13dd4ca_0    conda-forge
libaec                    1.1.2                h13dd4ca_1    conda-forge
libass                    0.17.1               hf7da4fe_1    conda-forge
libavif16                 1.0.4                h76840f6_0    conda-forge
libblas                   3.9.0           21_osxarm64_openblas    conda-forge
libboost                  1.82.0               h489e689_6    conda-forge
libboost-python           1.82.0          py311hcab0526_6    conda-forge
libbrotlicommon           1.1.0                hb547adb_1    conda-forge
libbrotlidec              1.1.0                hb547adb_1    conda-forge
libbrotlienc              1.1.0                hb547adb_1    conda-forge
libcblas                  3.9.0           21_osxarm64_openblas    conda-forge
libclang                  15.0.7          default_hd209bcb_4    conda-forge
libclang13                15.0.7          default_ha49e599_4    conda-forge
libcurl                   8.5.0                h2d989ff_0    conda-forge
libcxx                    16.0.6               h4653b0c_0    conda-forge
libdeflate                1.19                 hb547adb_0    conda-forge
libedit                   3.1.20191231         hc8eb9b7_2    conda-forge
libev                     4.33                 h93a5062_2    conda-forge
libexpat                  2.5.0                hb7217d7_1    conda-forge
libffi                    3.4.2                h3422bc3_5    conda-forge
libgd                     2.3.3                hfdf3952_9    conda-forge
libgfortran               5.0.0           13_2_0_hd922786_3    conda-forge
libgfortran5              13.2.0               hf226fd6_3    conda-forge
libglib                   2.78.3               hb438215_0    conda-forge
libgrpc                   1.60.0               hfc68871_1    conda-forge
libhwloc                  2.9.3           default_h4394839_1009    conda-forge
libiconv                  1.17                 h0d3ecfb_2    conda-forge
libidn2                   2.3.7                h93a5062_0    conda-forge
libjpeg-turbo             3.0.0                hb547adb_1    conda-forge
liblapack                 3.9.0           21_osxarm64_openblas    conda-forge
liblapacke                3.9.0           21_osxarm64_openblas    conda-forge
libllvm14                 14.0.6               hd1a9a77_4    conda-forge
libllvm15                 15.0.7               h2621b3d_4    conda-forge
libnghttp2                1.58.0               ha4dd798_1    conda-forge
libogg                    1.3.4                h27ca646_1    conda-forge
libopenblas               0.3.26          openmp_h6c19121_0    conda-forge
libopencv                 4.9.0           py311hdccf81a_7    conda-forge
libopenvino               2023.3.0             he6dadac_0    conda-forge
libopenvino-arm-cpu-plugin 2023.3.0             he6dadac_0    conda-forge
libopenvino-auto-batch-plugin 2023.3.0             hc9f00d9_0    conda-forge
libopenvino-auto-plugin   2023.3.0             hc9f00d9_0    conda-forge
libopenvino-hetero-plugin 2023.3.0             hf483cef_0    conda-forge
libopenvino-ir-frontend   2023.3.0             hf483cef_0    conda-forge
libopenvino-onnx-frontend 2023.3.0             h98f6304_0    conda-forge
libopenvino-paddle-frontend 2023.3.0             h98f6304_0    conda-forge
libopenvino-pytorch-frontend 2023.3.0             hebf3989_0    conda-forge
libopenvino-tensorflow-frontend 2023.3.0             hb5ee477_0    conda-forge
libopenvino-tensorflow-lite-frontend 2023.3.0             hebf3989_0    conda-forge
libopus                   1.3.1                h27ca646_1    conda-forge
libpng                    1.6.42               h091b4b1_0    conda-forge
libpq                     16.2                 h0f8b458_0    conda-forge
libprotobuf               4.25.1               h810fc01_1    conda-forge
libre2-11                 2023.06.02           h1753957_0    conda-forge
librsvg                   2.56.3               h55a2576_1    conda-forge
libsodium                 1.0.18               h27ca646_1    conda-forge
libsqlite                 3.45.1               h091b4b1_0    conda-forge
libssh2                   1.11.0               h7a5bd25_0    conda-forge
libtasn1                  4.19.0               h1a8c8d9_0    conda-forge
libtiff                   4.6.0                ha8a6c65_2    conda-forge
libunistring              0.9.10               h3422bc3_0    conda-forge
libvorbis                 1.3.7                h9f76cd9_0    conda-forge
libvpx                    1.13.1               hb765f3a_0    conda-forge
libwebp                   1.3.2                hf30222e_1    conda-forge
libwebp-base              1.3.2                hb547adb_0    conda-forge
libxcb                    1.15                 hf346824_0    conda-forge
libxml2                   2.12.5               h0d0cfa8_0    conda-forge
libzlib                   1.2.13               h53f4e23_5    conda-forge
libzopfli                 1.0.3                h9f76cd9_0    conda-forge
llvm-openmp               17.0.6               hcd81f8e_0    conda-forge
llvmlite                  0.42.0          py311hf5d242d_1    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lz4-c                     1.9.4                hb7217d7_0    conda-forge
magicgui                  0.8.1              pyhd8ed1ab_0    conda-forge
markdown                  3.5.2              pyhd8ed1ab_0    conda-forge
markdown-it-py            3.0.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.5           py311h05b510d_0    conda-forge
marshmallow               3.20.2             pyhd8ed1ab_0    conda-forge
marshmallow-jsonschema    0.13.0             pyhd8ed1ab_0    conda-forge
marshmallow-union         0.1.15.post1       pyhd8ed1ab_0    conda-forge
matplotlib-base           3.8.2           py311hfdba5f6_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.2              pyhd8ed1ab_0    conda-forge
micro-sam                 0.4.0                    pypi_0    pypi
mobile-sam                1.0                      pypi_0    pypi
mpc                       1.3.1                h91ba8db_0    conda-forge
mpfr                      4.2.1                h9546428_0    conda-forge
mpmath                    1.3.0              pyhd8ed1ab_0    conda-forge
mrcfile                   1.5.0              pyhd8ed1ab_0    conda-forge
msgpack-python            1.0.7           py311hd03642b_0    conda-forge
multidict                 6.0.5           py311he2be06e_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
mypy_extensions           1.0.0              pyha770c72_0    conda-forge
mysql-common              8.0.33               hf9e6398_6    conda-forge
mysql-libs                8.0.33               he3dca8b_6    conda-forge
napari                    0.4.19             pyh9208f05_0    conda-forge
napari-console            0.0.9              pyh9208f05_0    conda-forge
napari-plugin-engine      0.2.0              pyhd8ed1ab_2    conda-forge
napari-svg                0.1.10             pyhd8ed1ab_0    conda-forge
ncurses                   6.4                  h463b476_2    conda-forge
nest-asyncio              1.6.0              pyhd8ed1ab_0    conda-forge
nettle                    3.9.1                h40ed0f5_0    conda-forge
networkx                  3.2.1              pyhd8ed1ab_0    conda-forge
nifty                     1.2.1           py311h78cd012_4    conda-forge
npe2                      0.7.4              pyhd8ed1ab_0    conda-forge
nspr                      4.35                 hb7217d7_0    conda-forge
nss                       3.97                 h5ce2875_0    conda-forge
numba                     0.59.0          py311h00351ea_1    conda-forge
numcodecs                 0.12.1          py311hbaf5611_0    conda-forge
numpy                     1.26.4          py311h7125741_0    conda-forge
numpydoc                  1.5.0              pyhd8ed1ab_0    conda-forge
oauthlib                  3.2.2              pyhd8ed1ab_0    conda-forge
onnx                      1.15.0          py311hfcc1abf_1    conda-forge
onnxruntime               1.17.0          py311hde53a5b_1_cpu    conda-forge
opencv                    4.9.0           py311h404381a_7    conda-forge
openexr                   3.2.1                h73dd21e_1    conda-forge
openh264                  2.4.1                hebf3989_0    conda-forge
openjpeg                  2.5.0                h4c1507b_3    conda-forge
openpyxl                  3.1.2           py311heffc1b2_0    conda-forge
openssl                   3.2.1                h0d3ecfb_0    conda-forge
p11-kit                   0.24.1               h29577a5_0    conda-forge
packaging                 23.2               pyhd8ed1ab_0    conda-forge
pandas                    2.2.0           py311hfbe21a1_0    conda-forge
pango                     1.50.14              hcf40dda_2    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.4.1              pyhd8ed1ab_0    conda-forge
pcre2                     10.42                h26f9a81_0    conda-forge
pexpect                   4.9.0              pyhd8ed1ab_0    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    10.2.0          py311hb9c5795_0    conda-forge
pint                      0.23               pyhd8ed1ab_0    conda-forge
pip                       24.0               pyhd8ed1ab_0    conda-forge
pixman                    0.43.2               hebf3989_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_1    conda-forge
platformdirs              4.2.0              pyhd8ed1ab_0    conda-forge
pluggy                    1.4.0              pyhd8ed1ab_0    conda-forge
ply                       3.11                       py_1    conda-forge
pooch                     1.8.0              pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.42             pyha770c72_0    conda-forge
protobuf                  4.25.1          py311he791500_0    conda-forge
psutil                    5.9.8           py311h05b510d_0    conda-forge
psygnal                   0.9.5              pyhd8ed1ab_0    conda-forge
pthread-stubs             0.4               h27ca646_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pugixml                   1.14                 h13dd4ca_0    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
py-opencv                 4.9.0           py311he78c7fc_7    conda-forge
pyasn1                    0.5.1              pyhd8ed1ab_0    conda-forge
pyasn1-modules            0.3.0              pyhd8ed1ab_0    conda-forge
pycocotools               2.0.6           py311h4add359_1    conda-forge
pyconify                  0.1.6              pyhd8ed1ab_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pydantic                  1.10.13         py311h05b510d_1    conda-forge
pydantic-compat           0.1.1              pyhd8ed1ab_0    conda-forge
pygments                  2.17.2             pyhd8ed1ab_0    conda-forge
pyjwt                     2.8.0              pyhd8ed1ab_1    conda-forge
pyopengl                  3.1.6              pyhd8ed1ab_1    conda-forge
pyopenssl                 24.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.1.1              pyhd8ed1ab_0    conda-forge
pyproject_hooks           1.0.0              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.9          py311hc49b008_5    conda-forge
pyqt5-sip                 12.12.2         py311ha891d26_5    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
pytest                    8.1.1              pyhd8ed1ab_0    conda-forge
pytest-cov                4.1.0                    pypi_0    pypi
pytest-qt                 4.4.0              pyhd8ed1ab_0    conda-forge
python                    3.11.7          hdf0ec26_1_cpython    conda-forge
python-build              1.0.3              pyhd8ed1ab_0    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-elf                0.5.0              pyhd8ed1ab_0    conda-forge
python-flatbuffers        23.5.26            pyhd8ed1ab_0    conda-forge
python-stdnum             1.19               pyhd8ed1ab_0    conda-forge
python-tzdata             2023.4             pyhd8ed1ab_0    conda-forge
python-xxhash             3.4.1           py311heffc1b2_0    conda-forge
python_abi                3.11                    4_cp311    conda-forge
pytorch                   2.2.1                  py3.11_0    pytorch
pytz                      2024.1             pyhd8ed1ab_0    conda-forge
pyu2f                     0.1.5              pyhd8ed1ab_0    conda-forge
pywavelets                1.4.1           py311hb49d859_1    conda-forge
pyyaml                    6.0.1           py311heffc1b2_1    conda-forge
pyzmq                     25.1.2          py311h6727e71_0    conda-forge
qt-main                   5.15.8              h0a21348_18    conda-forge
qtconsole-base            5.5.1              pyha770c72_0    conda-forge
qtpy                      2.4.1              pyhd8ed1ab_0    conda-forge
rav1e                     0.6.6                h69fbcac_2    conda-forge
re2                       2023.06.02           h6135d0a_0    conda-forge
readline                  8.2                  h92ec313_1    conda-forge
referencing               0.33.0             pyhd8ed1ab_0    conda-forge
requests                  2.31.0             pyhd8ed1ab_0    conda-forge
requests-oauthlib         1.3.1              pyhd8ed1ab_0    conda-forge
rich                      13.7.0             pyhd8ed1ab_0    conda-forge
rpds-py                   0.17.1          py311h94f323b_0    conda-forge
rsa                       4.9                pyhd8ed1ab_0    conda-forge
ruamel.yaml               0.18.6          py311h05b510d_0    conda-forge
ruamel.yaml.clib          0.2.8           py311h05b510d_0    conda-forge
safetensors               0.4.2           py311h94f323b_0    conda-forge
scikit-image              0.22.0          py311h6e08293_2    conda-forge
scikit-learn              1.4.0           py311h696fe38_0    conda-forge
scipy                     1.12.0          py311h4f9446f_2    conda-forge
segment-anything          1.0                pyhd8ed1ab_1    conda-forge
setuptools                69.0.3             pyhd8ed1ab_0    conda-forge
shellingham               1.5.4              pyhd8ed1ab_0    conda-forge
sip                       6.8.3           py311h92babd0_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
skan                      0.11.1             pyhd8ed1ab_0    conda-forge
snappy                    1.1.10               h17c5cce_0    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
sphinx                    4.5.0              pyh6c4a22f_0    conda-forge
sphinxcontrib-applehelp   1.0.4              pyhd8ed1ab_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    2.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.5              pyhd8ed1ab_2    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
superqt                   0.6.1              pyh9208f05_0    conda-forge
svt-av1                   1.8.0                h463b476_0    conda-forge
sympy                     1.12            pypyh9d50eac_103    conda-forge
tbb                       2021.11.0            h2ffa867_1    conda-forge
tensorboard               2.15.2             pyhd8ed1ab_0    conda-forge
tensorboard-data-server   0.7.0           py311h5fb2c35_1    conda-forge
threadpoolctl             3.2.0              pyha21a80b_0    conda-forge
tifffile                  2024.1.30          pyhd8ed1ab_0    conda-forge
timm                      0.9.12             pyhd8ed1ab_0    conda-forge
tk                        8.6.13               h5083fa2_1    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tomli-w                   1.0.0              pyhd8ed1ab_0    conda-forge
toolz                     0.12.1             pyhd8ed1ab_0    conda-forge
torch_em                  0.6.1              pyhd8ed1ab_0    conda-forge
torchvision               0.17.1                py311_cpu    pytorch
tornado                   6.3.3           py311heffc1b2_1    conda-forge
tqdm                      4.66.2             pyhd8ed1ab_0    conda-forge
traitlets                 5.14.1             pyhd8ed1ab_0    conda-forge
typer                     0.9.0              pyhd8ed1ab_0    conda-forge
typing-extensions         4.9.0                hd8ed1ab_0    conda-forge
typing_extensions         4.9.0              pyha770c72_0    conda-forge
tzdata                    2024a                h0c530f3_0    conda-forge
urllib3                   2.2.0              pyhd8ed1ab_0    conda-forge
vigra                     1.11.2          py311hb7482d5_4    conda-forge
vispy                     0.14.1          py311h80bfdd0_0    conda-forge
wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
werkzeug                  3.0.1              pyhd8ed1ab_0    conda-forge
wheel                     0.42.0             pyhd8ed1ab_0    conda-forge
wrapt                     1.16.0          py311h05b510d_0    conda-forge
x264                      1!164.3095           h57fd34a_2    conda-forge
x265                      3.5                  hbc6ce65_3    conda-forge
xarray                    2024.1.1           pyhd8ed1ab_0    conda-forge
xorg-libxau               1.0.11               hb547adb_0    conda-forge
xorg-libxdmcp             1.1.3                h27ca646_0    conda-forge
xxhash                    0.8.2                hb547adb_0    conda-forge
xz                        5.2.6                h57fd34a_0    conda-forge
yaml                      0.2.5                h3422bc3_2    conda-forge
yarl                      1.9.4           py311h05b510d_0    conda-forge
z5py                      2.0.17          py311h4b05729_0    conda-forge
zarr                      2.16.1             pyhd8ed1ab_0    conda-forge
zeromq                    4.3.5                h965bd2d_0    conda-forge
zfp                       1.0.1                ha8f4885_0    conda-forge
zipp                      3.17.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h53f4e23_5    conda-forge
zlib-ng                   2.0.7                h1a8c8d9_0    conda-forge
zstd                      1.5.5                h4f39d0f_0    conda-forge

@constantinpape
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We should double check this again. I am confused that this happens with an M1 chipset for your private laptop @Marei33.
Could you bring it to the office some day this week so that we can double check this together?

@constantinpape
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We investigated this a bit further, and the only remaining test error on both of @Marei33 is this one:

Screenshot 2024-04-24 at 09 07 45

This is not so critical, because the corresponding prompt is not really used in the annotator tools. It's also gotten a bit more difficult to debug this due to #558. (So I will unlink this from the milestone.)

For reference, here are the two environments where the error occurs for @Marei33 :

Environment on M1(click to expand)

packages in environment at /Users/marei/mambaforge/envs/sam:

Name Version Build Channel

absl-py 2.1.0 pyhd8ed1ab_0 conda-forge
affogato 0.3.3 py310h5924a0a_3 conda-forge
alabaster 0.7.16 pyhd8ed1ab_0 conda-forge
annotated-types 0.6.0 pyhd8ed1ab_0 conda-forge
aom 3.8.2 h078ce10_0 conda-forge
app-model 0.2.6 pyhd8ed1ab_0 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
appnope 0.1.4 pyhd8ed1ab_0 conda-forge
asciitree 0.3.3 py_2 conda-forge
asttokens 2.4.1 pyhd8ed1ab_0 conda-forge
atk-1.0 2.38.0 hd03087b_2 conda-forge
attrs 23.2.0 pyh71513ae_0 conda-forge
babel 2.14.0 pyhd8ed1ab_0 conda-forge
bioimageio.core 0.5.11 pyhd8ed1ab_0 conda-forge
bioimageio.spec 0.4.9.post5 pyhd8ed1ab_0 conda-forge
blosc 1.21.5 hc338f07_0 conda-forge
brotli 1.1.0 hb547adb_1 conda-forge
brotli-bin 1.1.0 hb547adb_1 conda-forge
brotli-python 1.1.0 py310h1253130_1 conda-forge
brunsli 0.1 h9f76cd9_0 conda-forge
bzip2 1.0.8 h80987f9_5
c-ares 1.28.1 h93a5062_0 conda-forge
c-blosc2 2.14.3 ha57e6be_0 conda-forge
ca-certificates 2024.3.11 hca03da5_0
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachey 0.2.1 pyh9f0ad1d_0 conda-forge
cairo 1.18.0 hd1e100b_0 conda-forge
certifi 2024.2.2 pyhd8ed1ab_0 conda-forge
charls 2.4.2 h13dd4ca_0 conda-forge
charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
cloudpickle 3.0.0 pyhd8ed1ab_0 conda-forge
coin-or-cbc 2.10.10 hfaca913_0 conda-forge
coin-or-cgl 0.60.7 hf050ae7_0 conda-forge
coin-or-clp 1.17.8 h65c2c7c_0 conda-forge
coin-or-osi 0.108.10 h0dc0bf9_0 conda-forge
coin-or-utils 2.11.11 h0f73d51_0 conda-forge
coincbc 2.10.10 0_metapackage conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
coloredlogs 15.0.1 pyhd8ed1ab_3 conda-forge
comm 0.2.2 pyhd8ed1ab_0 conda-forge
contourpy 1.2.1 py310h21239e6_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cython 3.0.10 py310h692a8b6_0 conda-forge
cytoolz 0.12.3 py310hd125d64_0 conda-forge
dask-core 2024.4.2 pyhd8ed1ab_0 conda-forge
dav1d 1.2.1 hb547adb_0 conda-forge
debugpy 1.8.1 py310h692a8b6_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
docstring_parser 0.16 pyhd8ed1ab_0 conda-forge
docutils 0.21.2 pyhd8ed1ab_0 conda-forge
et_xmlfile 1.1.0 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge
executing 2.0.1 pyhd8ed1ab_0 conda-forge
expat 2.6.2 hebf3989_0 conda-forge
fasteners 0.17.3 pyhd8ed1ab_0 conda-forge
ffmpeg 6.1.1 gpl_h31ea89b_104 conda-forge
fftw 3.3.10 nompi_h3046061_108 conda-forge
filelock 3.13.4 pyhd8ed1ab_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_1 conda-forge
fontconfig 2.14.2 h82840c6_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.51.0 py310hd125d64_0 conda-forge
freetype 2.12.1 hadb7bae_2 conda-forge
freetype-py 2.4.0 pyhd8ed1ab_0 conda-forge
fribidi 1.0.10 h27ca646_0 conda-forge
fsspec 2024.3.1 pyhca7485f_0 conda-forge
gdk-pixbuf 2.42.11 h13c029f_0 conda-forge
gettext 0.22.5 h8fbad5d_2 conda-forge
gettext-tools 0.22.5 h8fbad5d_2 conda-forge
giflib 5.2.2 h93a5062_0 conda-forge
glib 2.80.0 hfc324ee_6 conda-forge
glib-tools 2.80.0 hb9a4d99_6 conda-forge
glpk 5.0 h6d7a090_0 conda-forge
gmp 6.3.0 hebf3989_1 conda-forge
gmpy2 2.1.5 py310he883d71_0 conda-forge
gnutls 3.7.9 hd26332c_0 conda-forge
graphite2 1.3.13 hebf3989_1003 conda-forge
graphviz 9.0.0 h3face73_1 conda-forge
grpcio 1.60.1 py310hf7687f1_0 conda-forge
gst-plugins-base 1.24.1 h09b4b5e_1 conda-forge
gstreamer 1.24.1 h551c6ff_1 conda-forge
gtk2 2.24.33 h7895bb2_4 conda-forge
gts 0.7.6 he42f4ea_4 conda-forge
h5py 3.11.0 nompi_py310h49e257e_100 conda-forge
harfbuzz 8.3.0 h8f0ba13_0 conda-forge
hdf5 1.14.3 nompi_h5bb55e9_100 conda-forge
heapdict 1.0.1 py_0 conda-forge
hsluv 5.0.4 pyhd8ed1ab_0 conda-forge
huggingface_hub 0.22.2 pyhd8ed1ab_0 conda-forge
humanfriendly 10.0 pyhd8ed1ab_6 conda-forge
icu 73.2 hc8870d7_0 conda-forge
idna 3.7 pyhd8ed1ab_0 conda-forge
imagecodecs 2024.1.1 py310h4705eb5_3 conda-forge
imageio 2.34.1 pyh4b66e23_0 conda-forge
imagesize 1.4.1 pyhd8ed1ab_0 conda-forge
imath 3.1.11 h1059232_0 conda-forge
importlib-metadata 7.1.0 pyha770c72_0 conda-forge
importlib_metadata 7.1.0 hd8ed1ab_0 conda-forge
importlib_resources 6.4.0 pyhd8ed1ab_0 conda-forge
in-n-out 0.2.0 pyhd8ed1ab_0 conda-forge
ipykernel 6.29.3 pyh3cd1d5f_0 conda-forge
ipython 8.22.2 pyh707e725_0 conda-forge
jasper 4.2.3 h7c0e182_0 conda-forge
jedi 0.19.1 pyhd8ed1ab_0 conda-forge
jinja2 3.1.3 pyhd8ed1ab_0 conda-forge
joblib 1.4.0 pyhd8ed1ab_0 conda-forge
jsonschema 4.21.1 pyhd8ed1ab_0 conda-forge
jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge
jupyter_client 8.6.1 pyhd8ed1ab_0 conda-forge
jupyter_core 5.7.2 py310hbe9552e_0 conda-forge
jxrlib 1.1 h93a5062_3 conda-forge
kiwisolver 1.4.5 py310h38f39d4_1 conda-forge
kornia 0.7.1 pyhd8ed1ab_0 conda-forge
krb5 1.21.2 h92f50d5_0 conda-forge
lame 3.100 h1a8c8d9_1003 conda-forge
lazy_loader 0.4 pyhd8ed1ab_0 conda-forge
lcms2 2.16 ha0e7c42_0 conda-forge
lemon 1.3.1 h7e262df_8 conda-forge
lerc 4.0.0 h9a09cb3_0 conda-forge
libabseil 20230802.1 cxx17_h13dd4ca_0 conda-forge
libaec 1.1.3 hebf3989_0 conda-forge
libasprintf 0.22.5 h8fbad5d_2 conda-forge
libasprintf-devel 0.22.5 h8fbad5d_2 conda-forge
libass 0.17.1 hf7da4fe_1 conda-forge
libavif16 1.0.4 h76840f6_1 conda-forge
libblas 3.9.0 22_osxarm64_openblas conda-forge
libboost 1.82.0 h489e689_6 conda-forge
libboost-python 1.82.0 py310h0d5016b_6 conda-forge
libbrotlicommon 1.1.0 hb547adb_1 conda-forge
libbrotlidec 1.1.0 hb547adb_1 conda-forge
libbrotlienc 1.1.0 hb547adb_1 conda-forge
libcblas 3.9.0 22_osxarm64_openblas conda-forge
libclang-cpp15 15.0.7 default_he012953_5 conda-forge
libclang13 18.1.3 default_h83d0a53_0 conda-forge
libcurl 8.7.1 h2d989ff_0 conda-forge
libcxx 16.0.6 h4653b0c_0 conda-forge
libdeflate 1.20 h93a5062_0 conda-forge
libedit 3.1.20191231 hc8eb9b7_2 conda-forge
libev 4.33 h93a5062_2 conda-forge
libexpat 2.6.2 hebf3989_0 conda-forge
libffi 3.4.4 hca03da5_0
libgd 2.3.3 hfdf3952_9 conda-forge
libgettextpo 0.22.5 h8fbad5d_2 conda-forge
libgettextpo-devel 0.22.5 h8fbad5d_2 conda-forge
libgfortran 5.0.0 13_2_0_hd922786_3 conda-forge
libgfortran5 13.2.0 hf226fd6_3 conda-forge
libglib 2.80.0 hfc324ee_6 conda-forge
libgrpc 1.60.1 hfc68871_0 conda-forge
libhwloc 2.10.0 default_h52d8fe8_1000 conda-forge
libhwy 1.1.0 h2ffa867_0 conda-forge
libiconv 1.17 h0d3ecfb_2 conda-forge
libidn2 2.3.7 h93a5062_0 conda-forge
libintl 0.22.5 h8fbad5d_2 conda-forge
libintl-devel 0.22.5 h8fbad5d_2 conda-forge
libjpeg-turbo 3.0.0 hb547adb_1 conda-forge
libjxl 0.10.2 h07599a0_0 conda-forge
liblapack 3.9.0 22_osxarm64_openblas conda-forge
liblapacke 3.9.0 22_osxarm64_openblas conda-forge
libllvm14 14.0.6 hd1a9a77_4 conda-forge
libllvm15 15.0.7 h2621b3d_4 conda-forge
libllvm18 18.1.3 h30cc82d_0 conda-forge
libnghttp2 1.58.0 ha4dd798_1 conda-forge
libogg 1.3.4 h27ca646_1 conda-forge
libopenblas 0.3.27 openmp_h6c19121_0 conda-forge
libopencv 4.9.0 py310hb0696bf_7 conda-forge
libopenvino 2023.3.0 he6dadac_1 conda-forge
libopenvino-arm-cpu-plugin 2023.3.0 he6dadac_1 conda-forge
libopenvino-auto-batch-plugin 2023.3.0 hc9f00d9_1 conda-forge
libopenvino-auto-plugin 2023.3.0 hc9f00d9_1 conda-forge
libopenvino-hetero-plugin 2023.3.0 hf483cef_1 conda-forge
libopenvino-ir-frontend 2023.3.0 hf483cef_1 conda-forge
libopenvino-onnx-frontend 2023.3.0 h98f6304_1 conda-forge
libopenvino-paddle-frontend 2023.3.0 h98f6304_1 conda-forge
libopenvino-pytorch-frontend 2023.3.0 hebf3989_1 conda-forge
libopenvino-tensorflow-frontend 2023.3.0 hb5ee477_1 conda-forge
libopenvino-tensorflow-lite-frontend 2023.3.0 hebf3989_1 conda-forge
libopus 1.3.1 h27ca646_1 conda-forge
libpng 1.6.43 h091b4b1_0 conda-forge
libpq 16.2 h0f8b458_1 conda-forge
libprotobuf 4.25.1 h810fc01_2 conda-forge
libre2-11 2023.09.01 h741fcf5_1 conda-forge
librsvg 2.58.0 hb3d354b_1 conda-forge
libsodium 1.0.18 h27ca646_1 conda-forge
libsqlite 3.45.3 h091b4b1_0 conda-forge
libssh2 1.11.0 h7a5bd25_0 conda-forge
libtasn1 4.19.0 h1a8c8d9_0 conda-forge
libtiff 4.6.0 h07db509_3 conda-forge
libtorch 2.1.2 cpu_generic_he83dea0_3 conda-forge
libunistring 0.9.10 h3422bc3_0 conda-forge
libuv 1.48.0 h93a5062_0 conda-forge
libvorbis 1.3.7 h9f76cd9_0 conda-forge
libvpx 1.13.1 hb765f3a_0 conda-forge
libwebp 1.3.2 hf30222e_1 conda-forge
libwebp-base 1.3.2 h93a5062_1 conda-forge
libxcb 1.15 hf346824_0 conda-forge
libxml2 2.12.6 h0d0cfa8_2 conda-forge
libzlib 1.2.13 h53f4e23_5 conda-forge
libzopfli 1.0.3 h9f76cd9_0 conda-forge
llvm-openmp 18.1.3 hcd81f8e_0 conda-forge
llvmlite 0.42.0 py310hf7687f1_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4-c 1.9.4 hb7217d7_0 conda-forge
magicgui 0.8.2 pyhd8ed1ab_1 conda-forge
markdown 3.6 pyhd8ed1ab_0 conda-forge
markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.5 py310hd125d64_0 conda-forge
marshmallow 3.21.1 pyhd8ed1ab_0 conda-forge
marshmallow-jsonschema 0.13.0 pyhd8ed1ab_0 conda-forge
marshmallow-union 0.1.15.post1 pyhd8ed1ab_0 conda-forge
matplotlib-base 3.8.4 py310h2439c42_0 conda-forge
matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge
mdurl 0.1.2 pyhd8ed1ab_0 conda-forge
micro_sam 0.5.0 pyhd8ed1ab_0 conda-forge
mpc 1.3.1 h91ba8db_0 conda-forge
mpfr 4.2.1 h41d338b_1 conda-forge
mpmath 1.3.0 pyhd8ed1ab_0 conda-forge
mrcfile 1.5.0 pyhd8ed1ab_0 conda-forge
msgpack-python 1.0.7 py310hd137fd4_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
mysql-common 8.3.0 hd1853d3_4 conda-forge
mysql-libs 8.3.0 hf036fc4_4 conda-forge
napari 0.4.19.post1 pyh9208f05_0 conda-forge
napari-console 0.0.9 pyh9208f05_0 conda-forge
napari-plugin-engine 0.2.0 pyhd8ed1ab_2 conda-forge
napari-svg 0.1.10 pyhd8ed1ab_0 conda-forge
ncurses 6.4 h313beb8_0
nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge
nettle 3.9.1 h40ed0f5_0 conda-forge
networkx 3.3 pyhd8ed1ab_1 conda-forge
nifty 1.2.1 py310hf354d2b_4 conda-forge
nomkl 1.0 h5ca1d4c_0 conda-forge
npe2 0.7.5 pyhd8ed1ab_0 conda-forge
nspr 4.35 hb7217d7_0 conda-forge
nss 3.98 h5ce2875_0 conda-forge
numba 0.59.1 py310hdf1f89a_0 conda-forge
numcodecs 0.12.1 py310hd5a4765_0 conda-forge
numpy 1.26.4 py310hd45542a_0 conda-forge
numpydoc 1.7.0 pyhd8ed1ab_0 conda-forge
onnx 1.15.0 py310hc02e61c_1 conda-forge
onnxruntime 1.17.3 py310hc728f9c_0_cpu conda-forge
opencv 4.9.0 py310h3038a9f_7 conda-forge
openexr 3.2.2 h2c51e1d_1 conda-forge
openh264 2.4.1 hebf3989_0 conda-forge
openjpeg 2.5.2 h9f1df11_0 conda-forge
openpyxl 3.1.2 py310h2aa6e3c_1 conda-forge
openssl 3.2.1 h0d3ecfb_1 conda-forge
p11-kit 0.24.1 h29577a5_0 conda-forge
packaging 24.0 pyhd8ed1ab_0 conda-forge
pandas 2.2.2 py310h401b61c_0 conda-forge
pango 1.52.2 hb067d4f_0 conda-forge
parso 0.8.4 pyhd8ed1ab_0 conda-forge
partd 1.4.1 pyhd8ed1ab_0 conda-forge
pcre2 10.43 h26f9a81_0 conda-forge
pexpect 4.9.0 pyhd8ed1ab_0 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 10.3.0 py310h81a8c2e_0 conda-forge
pint 0.23 pyhd8ed1ab_0 conda-forge
pip 23.3.1 py310hca03da5_0
pixman 0.43.4 hebf3989_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge
platformdirs 4.2.1 pyhd8ed1ab_0 conda-forge
ply 3.11 pyhd8ed1ab_2 conda-forge
pooch 1.8.1 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.42 pyha770c72_0 conda-forge
protobuf 4.25.1 py310haca1311_0 conda-forge
psutil 5.9.8 py310hd125d64_0 conda-forge
psygnal 0.11.0 pyhd8ed1ab_0 conda-forge
pthread-stubs 0.4 h27ca646_1001 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pugixml 1.14 h13dd4ca_0 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
py-opencv 4.9.0 py310h3196333_7 conda-forge
pycocotools 2.0.6 py310hf1a086a_1 conda-forge
pyconify 0.1.6 pyhd8ed1ab_0 conda-forge
pydantic 2.7.1 pyhd8ed1ab_0 conda-forge
pydantic-compat 0.1.2 pyhd8ed1ab_0 conda-forge
pydantic-core 2.18.2 py310h8ffd6aa_0 conda-forge
pygments 2.17.2 pyhd8ed1ab_0 conda-forge
pyopengl 3.1.6 pyhd8ed1ab_1 conda-forge
pyparsing 3.1.2 pyhd8ed1ab_0 conda-forge
pyproject_hooks 1.0.0 pyhd8ed1ab_0 conda-forge
pyqt 5.15.9 py310h2924129_5 conda-forge
pyqt5-sip 12.12.2 py310h1253130_5 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
python 3.10.13 h2469fbe_1_cpython conda-forge
python-build 1.2.1 pyhd8ed1ab_0 conda-forge
python-dateutil 2.9.0 pyhd8ed1ab_0 conda-forge
python-elf 0.5.0 pyhd8ed1ab_1 conda-forge
python-flatbuffers 24.3.25 pyh59ac667_0 conda-forge
python-stdnum 1.19 pyhd8ed1ab_0 conda-forge
python-tzdata 2024.1 pyhd8ed1ab_0 conda-forge
python-xxhash 3.4.1 py310h2aa6e3c_0 conda-forge
python_abi 3.10 4_cp310 conda-forge
pytorch 2.1.2 cpu_generic_py310h85d5aed_3 conda-forge
pytz 2024.1 pyhd8ed1ab_0 conda-forge
pywavelets 1.4.1 py310h280b8fa_1 conda-forge
pyyaml 6.0.1 py310h2aa6e3c_1 conda-forge
pyzmq 26.0.2 py310h18f1355_0 conda-forge
qt-main 5.15.8 hf679f28_21 conda-forge
qtconsole-base 5.5.1 pyha770c72_0 conda-forge
qtpy 2.4.1 pyhd8ed1ab_0 conda-forge
rav1e 0.6.6 h69fbcac_2 conda-forge
re2 2023.09.01 h4cba328_1 conda-forge
readline 8.2 h1a28f6b_0
referencing 0.34.0 pyhd8ed1ab_0 conda-forge
requests 2.31.0 pyhd8ed1ab_0 conda-forge
rich 13.7.1 pyhd8ed1ab_0 conda-forge
rpds-py 0.18.0 py310hf632f72_0 conda-forge
ruamel.yaml 0.18.6 py310hd125d64_0 conda-forge
ruamel.yaml.clib 0.2.8 py310hd125d64_0 conda-forge
safetensors 0.4.3 py310hd442715_0 conda-forge
scikit-image 0.22.0 py310h6e3cc31_2 conda-forge
scikit-learn 1.4.2 py310h7ef31dd_0 conda-forge
scipy 1.13.0 py310hf4b343e_0 conda-forge
segment-anything 1.0 pyhd8ed1ab_1 conda-forge
setuptools 68.2.2 py310hca03da5_0
shellingham 1.5.4 pyhd8ed1ab_0 conda-forge
sip 6.8.3 py310h692a8b6_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
skan 0.11.1 pyhd8ed1ab_0 conda-forge
sleef 3.5.1 h156473d_2 conda-forge
snappy 1.1.10 hd04f947_1 conda-forge
snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge
sphinx 7.3.7 pyhd8ed1ab_0 conda-forge
sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge
sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge
sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge
sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge
sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge
sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge
sqlite 3.41.2 h80987f9_0
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
superqt 0.6.3 pyh9208f05_0 conda-forge
svt-av1 1.8.0 h463b476_0 conda-forge
sympy 1.12 pypyh9d50eac_103 conda-forge
tabulate 0.9.0 pyhd8ed1ab_1 conda-forge
tbb 2021.12.0 h2ffa867_0 conda-forge
tensorboard 2.16.2 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py310hdd3b5e7_1 conda-forge
threadpoolctl 3.4.0 pyhc1e730c_0 conda-forge
tifffile 2024.4.18 pyhd8ed1ab_0 conda-forge
timm 0.9.16 pyhd8ed1ab_0 conda-forge
tk 8.6.13 h5083fa2_1 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.0.1 pyhd8ed1ab_0 conda-forge
tomli-w 1.0.0 pyhd8ed1ab_0 conda-forge
toolz 0.12.1 pyhd8ed1ab_0 conda-forge
torch_em 0.7.0 pyhd8ed1ab_0 conda-forge
torchvision 0.16.1 cpu_py310hae77e9a_3 conda-forge
tornado 6.4 py310hd125d64_0 conda-forge
tqdm 4.66.2 pyhd8ed1ab_0 conda-forge
traitlets 5.14.3 pyhd8ed1ab_0 conda-forge
typer 0.12.3 pyhd8ed1ab_0 conda-forge
typer-slim 0.12.3 pyhd8ed1ab_0 conda-forge
typer-slim-standard 0.12.3 hd8ed1ab_0 conda-forge
typing-extensions 4.11.0 hd8ed1ab_0 conda-forge
typing_extensions 4.11.0 pyha770c72_0 conda-forge
tzdata 2024a h04d1e81_0
unicodedata2 15.1.0 py310h2aa6e3c_0 conda-forge
urllib3 2.2.1 pyhd8ed1ab_0 conda-forge
vigra 1.11.2 py310h3ed307e_5 conda-forge
vispy 0.14.2 py310hac2ba9d_0 conda-forge
wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge
werkzeug 3.0.2 pyhd8ed1ab_0 conda-forge
wheel 0.41.2 py310hca03da5_0
wrapt 1.16.0 py310hd125d64_0 conda-forge
x264 1!164.3095 h57fd34a_2 conda-forge
x265 3.5 hbc6ce65_3 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xorg-libxau 1.0.11 hb547adb_0 conda-forge
xorg-libxdmcp 1.1.3 h27ca646_0 conda-forge
xxhash 0.8.2 hb547adb_0 conda-forge
xz 5.4.6 h80987f9_0
yaml 0.2.5 h3422bc3_2 conda-forge
z5py 2.0.17 py310hfd1a8ab_0 conda-forge
zarr 2.17.2 pyhd8ed1ab_0 conda-forge
zeromq 4.3.5 hebf3989_1 conda-forge
zfp 1.0.1 ha8f4885_0 conda-forge
zipp 3.17.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 h53f4e23_5 conda-forge
zlib-ng 2.0.7 h1a8c8d9_0 conda-forge
zstd 1.5.5 h4f39d0f_0 conda-forge

Environment on M3(click to expand)

packages in environment at /Users/marei/mambaforge/envs/sam:

Name Version Build Channel

absl-py 2.1.0 pyhd8ed1ab_0 conda-forge
affogato 0.3.3 py311h9e438b8_3 conda-forge
alabaster 0.7.16 pyhd8ed1ab_0 conda-forge
annotated-types 0.6.0 pyhd8ed1ab_0 conda-forge
aom 3.8.2 h078ce10_0 conda-forge
app-model 0.2.6 pyhd8ed1ab_0 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
appnope 0.1.4 pyhd8ed1ab_0 conda-forge
asciitree 0.3.3 py_2 conda-forge
asttokens 2.4.1 pyhd8ed1ab_0 conda-forge
atk-1.0 2.38.0 hd03087b_2 conda-forge
attrs 23.2.0 pyh71513ae_0 conda-forge
babel 2.14.0 pyhd8ed1ab_0 conda-forge
bioimageio.core 0.5.11 pyhd8ed1ab_0 conda-forge
bioimageio.spec 0.4.9.post5 pyhd8ed1ab_0 conda-forge
blosc 1.21.5 hc338f07_0 conda-forge
brotli 1.1.0 hb547adb_1 conda-forge
brotli-bin 1.1.0 hb547adb_1 conda-forge
brotli-python 1.1.0 py311ha891d26_1 conda-forge
brunsli 0.1 h9f76cd9_0 conda-forge
bzip2 1.0.8 h80987f9_5
c-ares 1.28.1 h93a5062_0 conda-forge
c-blosc2 2.14.3 ha57e6be_0 conda-forge
ca-certificates 2024.3.11 hca03da5_0
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachey 0.2.1 pyh9f0ad1d_0 conda-forge
cairo 1.18.0 hd1e100b_0 conda-forge
certifi 2024.2.2 pyhd8ed1ab_0 conda-forge
charls 2.4.2 h13dd4ca_0 conda-forge
charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
cloudpickle 3.0.0 pyhd8ed1ab_0 conda-forge
coin-or-cbc 2.10.10 hfaca913_0 conda-forge
coin-or-cgl 0.60.7 hf050ae7_0 conda-forge
coin-or-clp 1.17.8 h65c2c7c_0 conda-forge
coin-or-osi 0.108.10 h0dc0bf9_0 conda-forge
coin-or-utils 2.11.11 h0f73d51_0 conda-forge
coincbc 2.10.10 0_metapackage conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
coloredlogs 15.0.1 pyhd8ed1ab_3 conda-forge
comm 0.2.2 pyhd8ed1ab_0 conda-forge
contourpy 1.2.1 py311hcc98501_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cython 3.0.10 py311h92babd0_0 conda-forge
cytoolz 0.12.3 py311h05b510d_0 conda-forge
dask-core 2024.4.2 pyhd8ed1ab_0 conda-forge
dav1d 1.2.1 hb547adb_0 conda-forge
debugpy 1.8.1 py311h92babd0_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
docstring_parser 0.16 pyhd8ed1ab_0 conda-forge
docutils 0.21.2 pyhd8ed1ab_0 conda-forge
et_xmlfile 1.1.0 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge
executing 2.0.1 pyhd8ed1ab_0 conda-forge
expat 2.6.2 hebf3989_0 conda-forge
fasteners 0.17.3 pyhd8ed1ab_0 conda-forge
ffmpeg 6.1.1 gpl_h31ea89b_104 conda-forge
fftw 3.3.10 nompi_h3046061_108 conda-forge
filelock 3.13.4 pyhd8ed1ab_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_1 conda-forge
fontconfig 2.14.2 h82840c6_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.51.0 py311h05b510d_0 conda-forge
freetype 2.12.1 hadb7bae_2 conda-forge
freetype-py 2.4.0 pyhd8ed1ab_0 conda-forge
fribidi 1.0.10 h27ca646_0 conda-forge
fsspec 2024.3.1 pyhca7485f_0 conda-forge
gdk-pixbuf 2.42.11 h13c029f_0 conda-forge
gettext 0.22.5 h8fbad5d_2 conda-forge
gettext-tools 0.22.5 h8fbad5d_2 conda-forge
giflib 5.2.2 h93a5062_0 conda-forge
glib 2.80.0 hfc324ee_6 conda-forge
glib-tools 2.80.0 hb9a4d99_6 conda-forge
glpk 5.0 h6d7a090_0 conda-forge
gmp 6.3.0 hebf3989_1 conda-forge
gmpy2 2.1.5 py311hcabc2c5_0 conda-forge
gnutls 3.7.9 hd26332c_0 conda-forge
graphite2 1.3.13 hebf3989_1003 conda-forge
graphviz 9.0.0 h3face73_1 conda-forge
grpcio 1.60.1 py311hf5d242d_0 conda-forge
gst-plugins-base 1.24.1 h09b4b5e_1 conda-forge
gstreamer 1.24.1 h551c6ff_1 conda-forge
gtk2 2.24.33 h7895bb2_4 conda-forge
gts 0.7.6 he42f4ea_4 conda-forge
h5py 3.11.0 nompi_py311hd00467f_100 conda-forge
harfbuzz 8.3.0 h8f0ba13_0 conda-forge
hdf5 1.14.3 nompi_h5bb55e9_100 conda-forge
heapdict 1.0.1 py_0 conda-forge
hsluv 5.0.4 pyhd8ed1ab_0 conda-forge
huggingface_hub 0.22.2 pyhd8ed1ab_0 conda-forge
humanfriendly 10.0 pyhd8ed1ab_6 conda-forge
icu 73.2 hc8870d7_0 conda-forge
idna 3.7 pyhd8ed1ab_0 conda-forge
imagecodecs 2024.1.1 py311h9a59f95_3 conda-forge
imageio 2.34.1 pyh4b66e23_0 conda-forge
imagesize 1.4.1 pyhd8ed1ab_0 conda-forge
imath 3.1.11 h1059232_0 conda-forge
importlib-metadata 7.1.0 pyha770c72_0 conda-forge
importlib_metadata 7.1.0 hd8ed1ab_0 conda-forge
importlib_resources 6.4.0 pyhd8ed1ab_0 conda-forge
in-n-out 0.2.0 pyhd8ed1ab_0 conda-forge
ipykernel 6.29.3 pyh3cd1d5f_0 conda-forge
ipython 8.22.2 pyh707e725_0 conda-forge
jasper 4.2.3 h7c0e182_0 conda-forge
jedi 0.19.1 pyhd8ed1ab_0 conda-forge
jinja2 3.1.3 pyhd8ed1ab_0 conda-forge
joblib 1.4.0 pyhd8ed1ab_0 conda-forge
jsonschema 4.21.1 pyhd8ed1ab_0 conda-forge
jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge
jupyter_client 8.6.1 pyhd8ed1ab_0 conda-forge
jupyter_core 5.7.2 py311h267d04e_0 conda-forge
jxrlib 1.1 h93a5062_3 conda-forge
kiwisolver 1.4.5 py311he4fd1f5_1 conda-forge
kornia 0.7.1 pyhd8ed1ab_0 conda-forge
krb5 1.21.2 h92f50d5_0 conda-forge
lame 3.100 h1a8c8d9_1003 conda-forge
lazy_loader 0.4 pyhd8ed1ab_0 conda-forge
lcms2 2.16 ha0e7c42_0 conda-forge
lemon 1.3.1 h7e262df_8 conda-forge
lerc 4.0.0 h9a09cb3_0 conda-forge
libabseil 20230802.1 cxx17_h13dd4ca_0 conda-forge
libaec 1.1.3 hebf3989_0 conda-forge
libasprintf 0.22.5 h8fbad5d_2 conda-forge
libasprintf-devel 0.22.5 h8fbad5d_2 conda-forge
libass 0.17.1 hf7da4fe_1 conda-forge
libavif16 1.0.4 h76840f6_1 conda-forge
libblas 3.9.0 22_osxarm64_openblas conda-forge
libboost 1.82.0 h489e689_6 conda-forge
libboost-python 1.82.0 py311hcab0526_6 conda-forge
libbrotlicommon 1.1.0 hb547adb_1 conda-forge
libbrotlidec 1.1.0 hb547adb_1 conda-forge
libbrotlienc 1.1.0 hb547adb_1 conda-forge
libcblas 3.9.0 22_osxarm64_openblas conda-forge
libclang-cpp15 15.0.7 default_he012953_5 conda-forge
libclang13 18.1.3 default_h83d0a53_0 conda-forge
libcurl 8.7.1 h2d989ff_0 conda-forge
libcxx 16.0.6 h4653b0c_0 conda-forge
libdeflate 1.20 h93a5062_0 conda-forge
libedit 3.1.20191231 hc8eb9b7_2 conda-forge
libev 4.33 h93a5062_2 conda-forge
libexpat 2.6.2 hebf3989_0 conda-forge
libffi 3.4.4 hca03da5_0
libgd 2.3.3 hfdf3952_9 conda-forge
libgettextpo 0.22.5 h8fbad5d_2 conda-forge
libgettextpo-devel 0.22.5 h8fbad5d_2 conda-forge
libgfortran 5.0.0 13_2_0_hd922786_3 conda-forge
libgfortran5 13.2.0 hf226fd6_3 conda-forge
libglib 2.80.0 hfc324ee_6 conda-forge
libgrpc 1.60.1 hfc68871_0 conda-forge
libhwloc 2.10.0 default_h52d8fe8_1000 conda-forge
libhwy 1.1.0 h2ffa867_0 conda-forge
libiconv 1.17 h0d3ecfb_2 conda-forge
libidn2 2.3.7 h93a5062_0 conda-forge
libintl 0.22.5 h8fbad5d_2 conda-forge
libintl-devel 0.22.5 h8fbad5d_2 conda-forge
libjpeg-turbo 3.0.0 hb547adb_1 conda-forge
libjxl 0.10.2 h07599a0_0 conda-forge
liblapack 3.9.0 22_osxarm64_openblas conda-forge
liblapacke 3.9.0 22_osxarm64_openblas conda-forge
libllvm14 14.0.6 hd1a9a77_4 conda-forge
libllvm15 15.0.7 h2621b3d_4 conda-forge
libllvm18 18.1.3 h30cc82d_0 conda-forge
libnghttp2 1.58.0 ha4dd798_1 conda-forge
libogg 1.3.4 h27ca646_1 conda-forge
libopenblas 0.3.27 openmp_h6c19121_0 conda-forge
libopencv 4.9.0 py311hdccf81a_7 conda-forge
libopenvino 2023.3.0 he6dadac_1 conda-forge
libopenvino-arm-cpu-plugin 2023.3.0 he6dadac_1 conda-forge
libopenvino-auto-batch-plugin 2023.3.0 hc9f00d9_1 conda-forge
libopenvino-auto-plugin 2023.3.0 hc9f00d9_1 conda-forge
libopenvino-hetero-plugin 2023.3.0 hf483cef_1 conda-forge
libopenvino-ir-frontend 2023.3.0 hf483cef_1 conda-forge
libopenvino-onnx-frontend 2023.3.0 h98f6304_1 conda-forge
libopenvino-paddle-frontend 2023.3.0 h98f6304_1 conda-forge
libopenvino-pytorch-frontend 2023.3.0 hebf3989_1 conda-forge
libopenvino-tensorflow-frontend 2023.3.0 hb5ee477_1 conda-forge
libopenvino-tensorflow-lite-frontend 2023.3.0 hebf3989_1 conda-forge
libopus 1.3.1 h27ca646_1 conda-forge
libpng 1.6.43 h091b4b1_0 conda-forge
libpq 16.2 h0f8b458_1 conda-forge
libprotobuf 4.25.1 h810fc01_2 conda-forge
libre2-11 2023.09.01 h741fcf5_1 conda-forge
librsvg 2.58.0 hb3d354b_1 conda-forge
libsodium 1.0.18 h27ca646_1 conda-forge
libsqlite 3.45.3 h091b4b1_0 conda-forge
libssh2 1.11.0 h7a5bd25_0 conda-forge
libtasn1 4.19.0 h1a8c8d9_0 conda-forge
libtiff 4.6.0 h07db509_3 conda-forge
libtorch 2.1.2 cpu_generic_hda0de89_3 conda-forge
libunistring 0.9.10 h3422bc3_0 conda-forge
libuv 1.48.0 h93a5062_0 conda-forge
libvorbis 1.3.7 h9f76cd9_0 conda-forge
libvpx 1.13.1 hb765f3a_0 conda-forge
libwebp 1.3.2 hf30222e_1 conda-forge
libwebp-base 1.3.2 h93a5062_1 conda-forge
libxcb 1.15 hf346824_0 conda-forge
libxml2 2.12.6 h0d0cfa8_2 conda-forge
libzlib 1.2.13 h53f4e23_5 conda-forge
libzopfli 1.0.3 h9f76cd9_0 conda-forge
llvm-openmp 18.1.3 hcd81f8e_0 conda-forge
llvmlite 0.42.0 py311hf5d242d_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4-c 1.9.4 hb7217d7_0 conda-forge
magicgui 0.8.2 pyhd8ed1ab_1 conda-forge
markdown 3.6 pyhd8ed1ab_0 conda-forge
markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.5 py311h05b510d_0 conda-forge
marshmallow 3.21.1 pyhd8ed1ab_0 conda-forge
marshmallow-jsonschema 0.13.0 pyhd8ed1ab_0 conda-forge
marshmallow-union 0.1.15.post1 pyhd8ed1ab_0 conda-forge
matplotlib-base 3.8.4 py311hb58f1d1_0 conda-forge
matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge
mdurl 0.1.2 pyhd8ed1ab_0 conda-forge
micro_sam 0.5.0 pyhd8ed1ab_0 conda-forge
mpc 1.3.1 h91ba8db_0 conda-forge
mpfr 4.2.1 h41d338b_1 conda-forge
mpmath 1.3.0 pyhd8ed1ab_0 conda-forge
mrcfile 1.5.0 pyhd8ed1ab_0 conda-forge
msgpack-python 1.0.7 py311hd03642b_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
mysql-common 8.3.0 hd1853d3_4 conda-forge
mysql-libs 8.3.0 hf036fc4_4 conda-forge
napari 0.4.19.post1 pyh9208f05_0 conda-forge
napari-console 0.0.9 pyh9208f05_0 conda-forge
napari-plugin-engine 0.2.0 pyhd8ed1ab_2 conda-forge
napari-svg 0.1.10 pyhd8ed1ab_0 conda-forge
ncurses 6.4 h313beb8_0
nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge
nettle 3.9.1 h40ed0f5_0 conda-forge
networkx 3.3 pyhd8ed1ab_1 conda-forge
nifty 1.2.1 py311h78cd012_4 conda-forge
nomkl 1.0 h5ca1d4c_0 conda-forge
npe2 0.7.5 pyhd8ed1ab_0 conda-forge
nspr 4.35 hb7217d7_0 conda-forge
nss 3.98 h5ce2875_0 conda-forge
numba 0.59.1 py311h00351ea_0 conda-forge
numcodecs 0.12.1 py311hbaf5611_0 conda-forge
numpy 1.26.4 py311h7125741_0 conda-forge
numpydoc 1.7.0 pyhd8ed1ab_0 conda-forge
onnx 1.15.0 py311hfcc1abf_1 conda-forge
onnxruntime 1.17.3 py311h6029ae3_0_cpu conda-forge
opencv 4.9.0 py311h404381a_7 conda-forge
openexr 3.2.2 h2c51e1d_1 conda-forge
openh264 2.4.1 hebf3989_0 conda-forge
openjpeg 2.5.2 h9f1df11_0 conda-forge
openpyxl 3.1.2 py311heffc1b2_0 conda-forge
openssl 3.2.1 h0d3ecfb_1 conda-forge
p11-kit 0.24.1 h29577a5_0 conda-forge
packaging 24.0 pyhd8ed1ab_0 conda-forge
pandas 2.2.2 py311hfbe21a1_0 conda-forge
pango 1.52.2 hb067d4f_0 conda-forge
parso 0.8.4 pyhd8ed1ab_0 conda-forge
partd 1.4.1 pyhd8ed1ab_0 conda-forge
pcre2 10.43 h26f9a81_0 conda-forge
pexpect 4.9.0 pyhd8ed1ab_0 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 10.3.0 py311h0b5d0a1_0 conda-forge
pint 0.23 pyhd8ed1ab_0 conda-forge
pip 23.3.1 py311hca03da5_0
pixman 0.43.4 hebf3989_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge
platformdirs 4.2.1 pyhd8ed1ab_0 conda-forge
ply 3.11 pyhd8ed1ab_2 conda-forge
pooch 1.8.1 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.42 pyha770c72_0 conda-forge
protobuf 4.25.1 py311he791500_0 conda-forge
psutil 5.9.8 py311h05b510d_0 conda-forge
psygnal 0.11.0 pyhd8ed1ab_0 conda-forge
pthread-stubs 0.4 h27ca646_1001 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pugixml 1.14 h13dd4ca_0 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
py-opencv 4.9.0 py311he78c7fc_7 conda-forge
pycocotools 2.0.6 py311h4add359_1 conda-forge
pyconify 0.1.6 pyhd8ed1ab_0 conda-forge
pydantic 2.7.1 pyhd8ed1ab_0 conda-forge
pydantic-compat 0.1.2 pyhd8ed1ab_0 conda-forge
pydantic-core 2.18.2 py311h5d190b6_0 conda-forge
pygments 2.17.2 pyhd8ed1ab_0 conda-forge
pyopengl 3.1.6 pyhd8ed1ab_1 conda-forge
pyparsing 3.1.2 pyhd8ed1ab_0 conda-forge
pyproject_hooks 1.0.0 pyhd8ed1ab_0 conda-forge
pyqt 5.15.9 py311hc49b008_5 conda-forge
pyqt5-sip 12.12.2 py311ha891d26_5 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
python 3.11.8 hdf0ec26_0_cpython conda-forge
python-build 1.2.1 pyhd8ed1ab_0 conda-forge
python-dateutil 2.9.0 pyhd8ed1ab_0 conda-forge
python-elf 0.5.0 pyhd8ed1ab_1 conda-forge
python-flatbuffers 24.3.25 pyh59ac667_0 conda-forge
python-stdnum 1.19 pyhd8ed1ab_0 conda-forge
python-tzdata 2024.1 pyhd8ed1ab_0 conda-forge
python-xxhash 3.4.1 py311heffc1b2_0 conda-forge
python_abi 3.11 4_cp311 conda-forge
pytorch 2.1.2 cpu_generic_py311h38827da_3 conda-forge
pytz 2024.1 pyhd8ed1ab_0 conda-forge
pywavelets 1.4.1 py311hb49d859_1 conda-forge
pyyaml 6.0.1 py311heffc1b2_1 conda-forge
pyzmq 26.0.2 py311h93cf3d9_0 conda-forge
qt-main 5.15.8 hf679f28_21 conda-forge
qtconsole-base 5.5.1 pyha770c72_0 conda-forge
qtpy 2.4.1 pyhd8ed1ab_0 conda-forge
rav1e 0.6.6 h69fbcac_2 conda-forge
re2 2023.09.01 h4cba328_1 conda-forge
readline 8.2 h1a28f6b_0
referencing 0.34.0 pyhd8ed1ab_0 conda-forge
requests 2.31.0 pyhd8ed1ab_0 conda-forge
rich 13.7.1 pyhd8ed1ab_0 conda-forge
rpds-py 0.18.0 py311ha958965_0 conda-forge
ruamel.yaml 0.18.6 py311h05b510d_0 conda-forge
ruamel.yaml.clib 0.2.8 py311h05b510d_0 conda-forge
safetensors 0.4.3 py311h94f323b_0 conda-forge
scikit-image 0.22.0 py311h6e08293_2 conda-forge
scikit-learn 1.4.2 py311h696fe38_0 conda-forge
scipy 1.13.0 py311h4f9446f_0 conda-forge
segment-anything 1.0 pyhd8ed1ab_1 conda-forge
setuptools 68.2.2 py311hca03da5_0
shellingham 1.5.4 pyhd8ed1ab_0 conda-forge
sip 6.8.3 py311h92babd0_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
skan 0.11.1 pyhd8ed1ab_0 conda-forge
sleef 3.5.1 h156473d_2 conda-forge
snappy 1.1.10 hd04f947_1 conda-forge
snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge
sphinx 7.3.7 pyhd8ed1ab_0 conda-forge
sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge
sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge
sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge
sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge
sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge
sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge
sqlite 3.41.2 h80987f9_0
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
superqt 0.6.3 pyh9208f05_0 conda-forge
svt-av1 1.8.0 h463b476_0 conda-forge
sympy 1.12 pypyh9d50eac_103 conda-forge
tabulate 0.9.0 pyhd8ed1ab_1 conda-forge
tbb 2021.12.0 h2ffa867_0 conda-forge
tensorboard 2.16.2 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py311h5fb2c35_1 conda-forge
threadpoolctl 3.4.0 pyhc1e730c_0 conda-forge
tifffile 2024.4.18 pyhd8ed1ab_0 conda-forge
timm 0.9.16 pyhd8ed1ab_0 conda-forge
tk 8.6.13 h5083fa2_1 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.0.1 pyhd8ed1ab_0 conda-forge
tomli-w 1.0.0 pyhd8ed1ab_0 conda-forge
toolz 0.12.1 pyhd8ed1ab_0 conda-forge
torch_em 0.7.0 pyhd8ed1ab_0 conda-forge
torchvision 0.16.1 cpu_py311haf5c566_3 conda-forge
tornado 6.4 py311h05b510d_0 conda-forge
tqdm 4.66.2 pyhd8ed1ab_0 conda-forge
traitlets 5.14.3 pyhd8ed1ab_0 conda-forge
typer 0.12.3 pyhd8ed1ab_0 conda-forge
typer-slim 0.12.3 pyhd8ed1ab_0 conda-forge
typer-slim-standard 0.12.3 hd8ed1ab_0 conda-forge
typing-extensions 4.11.0 hd8ed1ab_0 conda-forge
typing_extensions 4.11.0 pyha770c72_0 conda-forge
tzdata 2024a h04d1e81_0
urllib3 2.2.1 pyhd8ed1ab_0 conda-forge
vigra 1.11.2 py311hf4257d2_5 conda-forge
vispy 0.14.2 py311h45dfa84_0 conda-forge
wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge
werkzeug 3.0.2 pyhd8ed1ab_0 conda-forge
wheel 0.41.2 py311hca03da5_0
wrapt 1.16.0 py311h05b510d_0 conda-forge
x264 1!164.3095 h57fd34a_2 conda-forge
x265 3.5 hbc6ce65_3 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xorg-libxau 1.0.11 hb547adb_0 conda-forge
xorg-libxdmcp 1.1.3 h27ca646_0 conda-forge
xxhash 0.8.2 hb547adb_0 conda-forge
xz 5.4.6 h80987f9_0
yaml 0.2.5 h3422bc3_2 conda-forge
z5py 2.0.17 py311h4b05729_0 conda-forge
zarr 2.17.2 pyhd8ed1ab_0 conda-forge
zeromq 4.3.5 hebf3989_1 conda-forge
zfp 1.0.1 ha8f4885_0 conda-forge
zipp 3.17.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 h53f4e23_5 conda-forge
zlib-ng 2.0.7 h1a8c8d9_0 conda-forge
zstd 1.5.5 h4f39d0f_0 conda-forge

Both use pytorch 2.1.2; my current guess is that this is causing this, I will recheck here once the MAC CI is running again.

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