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Differential expression performance improvements #234
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30e6250
Diffex perf
blrnw3 f169ab2
Diffex algo tweaks
blrnw3 6ef1a82
algo work and shift be gone
blrnw3 06a92b6
revert xarray change
blrnw3 0189df6
unrevert fine change
blrnw3 ae583f1
tdb bug
blrnw3 cf01a6e
merge with main
104e513
remove debugging print
ea76455
add note about tiledb workaround
462b01f
remove obsolete configuration hooks for diffexp parallelism
a414895
lint
05b9e1e
replace deprecated np.where use with recommended nonzero()
750eee4
simplify X slicing
c0f4f46
Merge branch 'main' into brodgers/diffex
2074d08
Merge branch 'main' into brodgers/diffex
191edfd
remove tiledb 0.13.1 work-arounds
e1e47ba
revert tiledb.Ctx handling to correctly use configuration subsystem
075c00c
clean up tiledb config params
63f5db5
smaller size for default python tiledb query buffer
f294595
try even smaller default python buffer
002120b
1GB default tiledb python buffer
b395933
Add high performance diffex routes (#244)
ab9de54
Merge branch 'main' into brodgers/diffex
ebezzi 46b37ce
Merge branch 'main' into brodgers/diffex
ebezzi 3b86eae
Infra changes
ebezzi 00e9930
Replace modules with symlinks
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the setting for prod is in single-cell-infra, PR incoming