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feat: update apiv2 db ingestion to support new s3 schema #324

Merged
merged 33 commits into from
Oct 21, 2024
Merged

feat: update apiv2 db ingestion to support new s3 schema #324

merged 33 commits into from
Oct 21, 2024

Commits on Oct 15, 2024

  1. Checkpoint.

    @jgadling
    jgadling committed Oct 15, 2024
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  2. Tweaks.

    @jgadling
    jgadling committed Oct 15, 2024
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  3. Starting to get test files in order.

    @jgadling
    jgadling committed Oct 15, 2024
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  4. Add s3fs dependency

    @jgadling
    jgadling committed Oct 15, 2024
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  5. New test data.

    @jgadling
    jgadling committed Oct 15, 2024
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  6. Fixed.

    @jgadling
    jgadling committed Oct 15, 2024
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  7. Update.

    @jgadling
    jgadling committed Oct 15, 2024
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  8. tests.

    @jgadling
    jgadling committed Oct 15, 2024
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  9. Get alignments semi-working.

    @jgadling
    jgadling committed Oct 15, 2024
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  10. Tweaks.

    @jgadling
    jgadling committed Oct 15, 2024
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  11. calculate some missing fields.

    @jgadling
    jgadling committed Oct 15, 2024
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  12. Fixes for missing fields.

    @jgadling
    jgadling committed Oct 15, 2024
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Commits on Oct 16, 2024

  1. Annoation and s3 path fixes.

    @jgadling
    jgadling committed Oct 16, 2024
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  2. Fix alignment ids

    @jgadling
    jgadling committed Oct 16, 2024
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  3. Fix tiltseries path.

    @jgadling
    jgadling committed Oct 16, 2024
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  4. Fix path handling for v1 ingest.

    @jgadling
    jgadling committed Oct 16, 2024
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  5. Fix finders for v1 ingestion.

    @jgadling
    jgadling committed Oct 16, 2024
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Commits on Oct 17, 2024

  1. Fix neuroglancer path.

    @jgadling
    jgadling committed Oct 17, 2024
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  2. allow missing keys in metadata, and speed boost.

    @jgadling
    jgadling committed Oct 17, 2024
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  3. Disable annotation deletion by default.

    @jgadling
    jgadling committed Oct 17, 2024
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  4. Use a compound key for annotations.

    @jgadling
    jgadling committed Oct 17, 2024
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  5. Update utilities.

    @jgadling
    jgadling committed Oct 17, 2024
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  6. Remove unnecessary flag.

    @jgadling
    jgadling committed Oct 17, 2024
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  7. Fix outdent.

    @jgadling
    jgadling committed Oct 17, 2024
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  8. Fix LIKE

    @jgadling
    jgadling committed Oct 17, 2024
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Commits on Oct 18, 2024

  1. Fix https url.

    @jgadling
    jgadling committed Oct 18, 2024
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  2. Fix some tests.

    @jgadling
    jgadling committed Oct 18, 2024
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Commits on Oct 21, 2024

  1. fix more tests and lint.

    @jgadling
    jgadling committed Oct 21, 2024
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  2. Lint.

    @jgadling
    jgadling committed Oct 21, 2024
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  3. Fixes.

    @jgadling
    jgadling committed Oct 21, 2024
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  4. Tests.

    @jgadling
    jgadling committed Oct 21, 2024
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  5. Fixes.

    @jgadling
    jgadling committed Oct 21, 2024
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  6. Add missing file.

    @jgadling
    jgadling committed Oct 21, 2024
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