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RDynamut2.Mlog
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RDynamut2.Mlog
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# Current Positives|Negatives threshold (thr) is 0 (ddG >= 0 are not-destabilizing [positives] and ddG < 0 are destabilizing [negatives]).
aa S D T TP avg err FP TN avg err FN P N SEN SPE PPV NPV ACC accn RMSE MAE PCC Sc Ob1 Ob2 MCC
X 253 89 342 44 1.9 1.6 22 67 -0.7 0.6 209 66 276 0.174 0.753 0.667 0.243 0.325 0.463 2.371 1.848 0.045 41.5 44.4 14.0 -0.08
A 77 20 97 14 2.8 2.3 1 19 -1.0 0.7 63 15 82 0.182 0.950 0.933 0.232 0.340 0.566 2.780 2.243 0.233 34.0 51.5 14.4 0.15
V 80 26 106 12 1.2 1.2 12 14 -0.5 0.7 68 24 82 0.150 0.538 0.500 0.171 0.245 0.344 2.216 1.741 -0.090 45.3 43.4 11.3 -0.32
I 58 10 68 9 2.5 2.0 3 7 -0.8 0.5 49 12 56 0.155 0.700 0.750 0.125 0.235 0.428 2.350 2.045 0.355 35.3 52.9 11.8 -0.13
L 31 10 41 7 2.2 1.7 5 5 -0.6 0.9 24 12 29 0.226 0.500 0.583 0.172 0.293 0.363 2.485 2.002 0.139 43.9 39.0 17.1 -0.26
M 32 7 39 4 2.0 1.8 2 5 -0.4 0.5 28 6 33 0.125 0.714 0.667 0.152 0.231 0.420 2.280 1.953 -0.111 33.3 43.6 23.1 -0.17
F 28 7 35 7 1.1 1.0 1 6 -0.4 1.3 21 8 27 0.250 0.857 0.875 0.222 0.371 0.554 2.563 1.915 0.065 45.7 37.1 17.1 0.10
W 3 0 3 0 0.0 0.0 0 0 0.0 0.0 3 0 3 0.000 0.000 0.000 0.000 0.000 0.000 6.125 6.111 0.902 0.0 0.0 100.0 0.00
Y 17 2 19 5 1.0 1.1 0 2 -0.2 1.3 12 5 14 0.294 1.000 1.000 0.143 0.368 0.647 2.961 2.167 -0.183 36.8 47.4 15.8 0.20
R 17 3 20 3 1.3 1.2 1 2 -0.2 0.1 14 4 16 0.176 0.667 0.750 0.125 0.250 0.422 3.059 2.378 -0.615 40.0 35.0 25.0 -0.14
H 2 4 6 1 2.1 1.2 0 4 -1.0 0.8 1 1 5 0.500 1.000 1.000 0.800 0.833 0.750 1.676 1.328 0.548 33.3 66.7 0.0 0.63
K 10 7 17 3 2.0 1.5 1 6 -0.8 0.6 7 4 13 0.300 0.857 0.750 0.462 0.529 0.579 2.239 1.413 0.217 52.9 41.2 5.9 0.18
D 12 16 28 3 2.4 2.2 4 12 -1.5 0.8 9 7 21 0.250 0.750 0.429 0.571 0.536 0.500 1.451 1.189 0.511 53.6 46.4 0.0 0.00
E 8 8 16 1 1.0 0.1 1 7 -0.3 0.2 7 2 14 0.125 0.875 0.500 0.500 0.500 0.500 1.279 0.814 -0.270 81.2 6.2 12.5 0.00
S 30 15 45 3 1.5 1.4 2 13 -0.4 0.5 27 5 40 0.100 0.867 0.600 0.325 0.356 0.483 1.843 1.345 0.030 60.0 28.9 11.1 -0.05
T 40 13 53 6 1.7 1.1 3 10 -0.4 0.8 34 9 44 0.150 0.769 0.667 0.227 0.302 0.460 2.111 1.792 0.160 28.3 56.6 15.1 -0.09
N 13 11 24 5 0.8 0.7 3 8 -0.8 0.3 8 8 16 0.385 0.727 0.625 0.500 0.542 0.556 1.751 1.116 -0.043 54.2 41.7 4.2 0.12
Q 6 3 9 2 1.4 1.2 1 2 -0.3 0.3 4 3 6 0.333 0.667 0.667 0.333 0.444 0.500 1.151 1.008 0.057 55.6 33.3 11.1 0.00
C 12 2 14 0 0.0 0.0 0 2 -0.9 0.3 12 0 14 0.000 1.000 0.000 0.143 0.143 0.500 3.147 2.761 0.021 21.4 21.4 57.1 0.00
G 23 7 30 3 2.9 2.5 1 6 -0.7 0.7 20 4 26 0.130 0.857 0.750 0.231 0.300 0.494 2.567 2.085 0.243 26.7 63.3 10.0 -0.02
P 7 7 14 0 0.0 0.0 3 4 -0.6 0.5 7 3 11 0.000 0.571 0.000 0.364 0.286 0.286 1.861 1.426 -0.635 50.0 50.0 0.0 -0.52
p 0 0 0 0 0.0 0.0 0 0 0.0 0.0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.0 0.0 0.0 0.00
sb 36 4 40 12 3.0 2.4 0 4 -1.1 0.7 24 12 28 0.333 1.000 1.000 0.143 0.400 0.667 3.196 2.782 0.245 15.0 77.5 7.5 0.22
bs 7 8 15 0 0.0 0.0 0 8 -0.7 0.7 7 0 15 0.000 1.000 0.000 0.533 0.533 0.500 3.521 2.605 -0.185 53.3 6.7 40.0 0.00
pn 0 2 2 0 0.0 0.0 0 2 -1.2 0.8 0 0 2 0.000 1.000 0.000 1.000 1.000 0.500 0.967 0.813 1.000 50.0 50.0 0.0 0.00
np 6 1 7 2 2.2 1.7 0 1 -0.5 0.2 4 2 5 0.333 1.000 1.000 0.200 0.429 0.667 2.099 1.579 -0.043 57.1 28.6 14.3 0.26
wh 10 6 16 4 1.4 1.2 4 2 -0.2 0.2 6 8 8 0.400 0.333 0.500 0.250 0.375 0.367 2.273 1.406 -0.047 62.5 37.5 0.0 -0.26
hw 10 5 15 0 0.0 0.0 0 5 -2.1 1.2 10 0 15 0.000 1.000 0.000 0.333 0.333 0.500 2.701 2.201 -0.201 53.3 13.3 33.3 0.00
nh 31 4 35 5 2.0 1.9 0 4 -0.5 0.4 26 5 30 0.161 1.000 1.000 0.133 0.257 0.581 2.493 2.023 0.041 31.4 51.4 17.1 0.15
hn 33 21 54 5 2.0 1.5 2 19 -0.4 0.8 28 7 47 0.152 0.905 0.714 0.404 0.444 0.528 1.939 1.517 0.297 40.7 51.9 7.4 0.08
nw 10 5 15 0 0.0 0.0 1 4 -1.3 0.9 10 1 14 0.000 0.800 0.000 0.286 0.267 0.400 2.917 2.286 -0.122 26.7 66.7 6.7 -0.38
wn 8 8 16 5 0.9 0.9 2 6 -0.3 0.2 3 7 9 0.625 0.750 0.714 0.667 0.688 0.688 0.975 0.740 -0.050 68.8 31.2 0.0 0.38
h0 162 49 211 25 2.1 1.7 11 38 -0.8 0.8 137 36 175 0.154 0.776 0.694 0.217 0.299 0.465 2.480 2.005 0.120 38.9 44.5 16.6 -0.08
n0 29 25 54 12 1.3 1.2 8 17 -0.5 0.3 17 20 34 0.414 0.680 0.600 0.500 0.537 0.547 1.661 1.063 0.075 61.1 35.2 3.7 0.10
w0 60 14 74 7 2.0 1.8 3 11 -0.8 0.7 53 10 64 0.117 0.786 0.700 0.172 0.243 0.451 2.531 2.027 -0.053 32.4 52.7 14.9 -0.11
0h 159 33 192 28 2.0 1.7 13 20 -0.6 0.6 131 41 151 0.176 0.606 0.683 0.132 0.250 0.391 2.587 2.086 0.054 38.0 45.3 16.7 -0.20
0w 31 20 51 3 2.0 1.6 2 18 -1.3 0.7 28 5 46 0.097 0.900 0.600 0.391 0.412 0.498 2.352 1.711 -0.035 49.0 37.3 13.7 -0.01
0n 59 34 93 11 1.5 1.2 6 28 -0.4 0.7 48 17 76 0.186 0.824 0.647 0.368 0.419 0.505 1.925 1.475 0.112 45.2 46.2 8.6 0.01
pp 2 0 2 0 0.0 0.0 0 0 0.0 0.0 2 0 2 0.000 0.000 0.000 0.000 0.000 0.000 2.448 1.796 -1.000 50.0 50.0 0.0 0.00
nn 0 0 0 0 0.0 0.0 0 0 0.0 0.0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.0 0.0 0.0 0.00
X # A # V # I # L # M # F # W # Y # R # H # K # D # E # S # T # N # Q # C # G # P #
X 0.0 342 -0.3 22 -0.1 72 0.3 48 0.6 20 0.3 12 0.0 13 0 0 0.1 12 -0.5 15 * 2 0.0 11 0.6 16 -1.0 3 0.2 20 0.2 45 -0.3 6 0.1 6 0.7 5 0.5 9 -0.8 5
A 0.4 75 0 0 0.5 14 -0.0 15 0.9 7 * 1 -0.1 4 0 0 * 1 * 1 * 1 -1.0 3 0.9 7 0 0 0.1 5 0.1 4 * 1 * 1 * 1 0.2 8 * 1
V -0.1 34 -0.1 4 0 0 0.4 16 * 2 0 0 * 1 0 0 0 0 * 1 0 0 0 0 0 0 0 0 * 1 0.5 9 0 0 0 0 0 0 0 0 0 0
I 0.1 20 * 1 -0.9 10 0 0 * 2 * 2 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0.7 3 0 0 0 0 0 0 0 0 0 0
L -0.2 21 * 2 -0.8 7 -1.0 3 0 0 -0.3 5 * 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 * 1 0 0 0 0 0 0 0 0 0 0
M -0.5 27 0 0 -0.9 8 -0.2 8 -0.1 7 0 0 * 2 0 0 0 0 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0 0 0
F 0.3 22 * 2 -0.9 3 0 0 * 2 * 1 0 0 0 0 0.5 10 0 0 0 0 0 0 0 0 0 0 * 2 * 1 0 0 0 0 * 1 0 0 0 0
W 0.9 3 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0
Y -0.5 7 0 0 -0.5 3 * 1 0 0 * 1 0 0 0 0 0 0 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0
R 0.1 5 0 0 -1.0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 * 1 0 0 0 0 0 0 0 0 0 0
H 0.6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0 * 1 * 1 0 0 * 1 0 0 0 0 0 0 0 0 0 0
K 0.2 6 0 0 * 1 0 0 0 0 * 2 0 0 0 0 0 0 * 1 0 0 0 0 0 0 0 0 * 1 0 0 0 0 * 1 0 0 0 0 0 0
D -0.1 12 0 0 -0.1 4 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0 0 0 0 0 * 1 -1.0 3 * 2 0 0 0 0 * 1 0 0
E -0.3 13 0 0 * 1 0 0 0 0 0 0 0 0 0 0 0 0 -0.9 3 0 0 0.4 3 0 0 0 0 * 1 * 2 * 1 * 2 0 0 0 0 0 0
S -0.2 25 -0.6 9 0.7 4 0 0 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0 * 1 0 0 0 0 -0.6 9 0 0 0 0 * 1 0 0 0 0
T -0.1 8 0 0 -0.5 3 * 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 * 2 0 0 0 0 0 0 0 0 0 0 * 1
N 0.3 18 0 0 -0.7 3 0 0 0 0 0 0 * 2 0 0 0 0 * 1 0 0 * 1 0.8 5 * 1 * 2 -1.0 3 0 0 0 0 0 0 0 0 0 0
Q -0.9 3 0 0 0 0 0 0 0 0 0 0 * 1 0 0 0 0 * 1 0 0 0 0 0 0 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 9 * 1 * 2 * 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 5 0 0 0 0 0 0 0 0 0 0
G 0.2 21 0 0 0.9 5 * 1 0 0 0 0 0 0 0 0 * 1 * 1 0 0 -0.7 3 0 0 0 0 * 1 -0.4 3 * 2 * 1 0 0 0 0 -0.8 3
P -0.5 9 * 2 * 1 * 1 0 0 0 0 0 0 0 0 0 0 0 0 * 1 * 1 * 2 0 0 * 1 0 0 0 0 0 0 0 0 0 0 0 0