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[Scipy] Add platform macosx-arm64 #1516

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merged 18 commits into from
Jul 5, 2024
Merged

[Scipy] Add platform macosx-arm64 #1516

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4452166
Add platform macosx-arm64 to cpython
Jun 25, 2024
4e0b2da
Fix brew path in install_name_tool
Jun 25, 2024
77f34d7
Add platform macosx-arm64 to numpy
HGuillemet Jun 27, 2024
0910424
Add platform macosx-arm64 to scipy
HGuillemet Jun 27, 2024
27731f2
Use clang on macos and msvc on windows
HGuillemet Jun 30, 2024
2d38a2e
Use gcc. Add gcc@10 on macos-14 runner
HGuillemet Jun 30, 2024
dbcda4c
Use gcc 13 on macosx arm64
HGuillemet Jun 30, 2024
646fd1d
Fix path of gcc on macosx-arm64
HGuillemet Jun 30, 2024
4852ae8
Fix gfortran detection
HGuillemet Jun 30, 2024
4795288
Fix gfortran detection
HGuillemet Jun 30, 2024
e104ee5
Patch rpath for gcc@13
HGuillemet Jul 1, 2024
752a740
Fix dylib filtering
HGuillemet Jul 1, 2024
dd03079
Version-agnostic detection of gfortran
HGuillemet Jul 1, 2024
cf8e686
Fix version-agnostic detection of gfortran
HGuillemet Jul 1, 2024
a669b8a
Use gcc@13 on both macosx arch
HGuillemet Jul 1, 2024
4db72e6
Fix gfortran detection
HGuillemet Jul 1, 2024
24f305c
Update CHANGELOG.md and fix nits
saudet Jul 5, 2024
f358e84
Fix nits
saudet Jul 5, 2024
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40 changes: 21 additions & 19 deletions .github/actions/deploy-macosx/action.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -34,25 +34,27 @@ runs:
# brew install cmake.rb

if [[ -n ${CI_DEPLOY_NEED_GCC:-} ]]; then
echo Installing an older less buggy version of GCC
brew install gcc@10
brew link --overwrite gcc@10

echo Removing "fixed" header files that are actually broken
sudo rm -Rf $(find /usr/local/Cellar/gcc@10/ -iname include-fixed)

echo Fixing up some binaries to support rpath
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libgomp.1.dylib /usr/local/lib/gcc/10/libgomp.1.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libstdc++.6.dylib /usr/local/lib/gcc/10/libstdc++.6.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libgfortran.5.dylib /usr/local/lib/gcc/10/libgfortran.5.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libquadmath.0.dylib /usr/local/lib/gcc/10/libquadmath.0.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libgcc_s.1.dylib
sudo install_name_tool -change $(otool -L /usr/local/lib/gcc/10/libgfortran.5.dylib | grep /usr/local/Cellar/gcc@10/ | cut -f1 -d ' ') @rpath/libquadmath.0.dylib /usr/local/lib/gcc/10/libgfortran.5.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libgomp.1.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libstdc++.6.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libgfortran.5.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libquadmath.0.dylib
otool -L /usr/local/lib/gcc/10/*.dylib
if [ $(arch) = "arm64" ]; then
brew install gcc@13
brew link --overwrite gcc@13
else
brew install gcc@10
brew link --overwrite gcc@10
echo Removing "fixed" header files that are actually broken
sudo rm -Rf $(find /usr/local/Cellar/gcc@10/ -iname include-fixed)
echo Fixing up some binaries to support rpath
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libgomp.1.dylib /usr/local/lib/gcc/10/libgomp.1.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libstdc++.6.dylib /usr/local/lib/gcc/10/libstdc++.6.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libgfortran.5.dylib /usr/local/lib/gcc/10/libgfortran.5.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libquadmath.0.dylib /usr/local/lib/gcc/10/libquadmath.0.dylib
sudo install_name_tool -add_rpath /usr/local/lib/gcc/10/ -add_rpath @loader_path/. -id @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libgcc_s.1.dylib
sudo install_name_tool -change $(otool -L /usr/local/lib/gcc/10/libgfortran.5.dylib | grep /usr/local/Cellar/gcc@10/ | cut -f1 -d ' ') @rpath/libquadmath.0.dylib /usr/local/lib/gcc/10/libgfortran.5.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libgomp.1.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libstdc++.6.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libgfortran.5.dylib
sudo install_name_tool -change /usr/local/lib/gcc/10/libgcc_s.1.dylib @rpath/libgcc_s.1.dylib /usr/local/lib/gcc/10/libquadmath.0.dylib
otool -L /usr/local/lib/gcc/10/*.dylib
fi
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fi

sudo install_name_tool -add_rpath @loader_path/. -id @rpath/libomp.dylib `brew ls libomp|grep libomp.dylib`
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6 changes: 5 additions & 1 deletion .github/workflows/scipy.yml
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Expand Up @@ -38,10 +38,14 @@ jobs:
runs-on: ubuntu-20.04
steps:
- uses: bytedeco/javacpp-presets/.github/actions/deploy-ubuntu@actions
macosx-arm64:
runs-on: macos-14
steps:
- uses: HGuillemet/javacpp-presets/.github/actions/deploy-macosx@scipy-macosx-arm64
macosx-x86_64:
runs-on: macos-12
steps:
- uses: bytedeco/javacpp-presets/.github/actions/deploy-macosx@actions
- uses: HGuillemet/javacpp-presets/.github/actions/deploy-macosx@scipy-macosx-arm64
# windows-x86:
# runs-on: windows-2019
# steps:
Expand Down
1 change: 1 addition & 0 deletions pom.xml
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Expand Up @@ -1463,6 +1463,7 @@
<module>openblas</module>
<module>cpython</module>
<module>numpy</module>
<module>scipy</module>
<module>llvm</module>
<module>libffi</module>
<module>libpostal</module>
Expand Down
13 changes: 12 additions & 1 deletion scipy/cppbuild.sh
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Expand Up @@ -169,7 +169,18 @@ case $PLATFORM in
ATLAS=None CC="gcc -m64 -D__STDC_NO_THREADS__" FFLAGS="-m64 -fPIC" "$PYTHON_BIN_PATH" -m pip install . --prefix $INSTALL_PATH --config-settings=builddir=build
strip $(find ../ -iname *.so)
;;
macosx-*)
macosx-arm64)
export F77="$(brew ls gcc@13 | grep bin/gfortran | head -n 1)"
export F90="$F77"
export LDFLAGS="-L/usr/lib/"
ATLAS=None FC="$F77" "$PYTHON_BIN_PATH" -m pip install . --prefix $INSTALL_PATH --config-settings=builddir=build
# need to add RPATH so it can find MKL in cache
for f in $(find ../ -iname *.so); do
install_name_tool -add_rpath @loader_path/../../../ -add_rpath @loader_path/../../../../ $f || true;
codesign --force -s - $f
done
;;
macosx-x86_64)
export F77="$(ls -1 /usr/local/bin/gfortran-* | head -n 1)"
export F90="$F77"
export LDFLAGS="-L/usr/lib/"
Expand Down
9 changes: 8 additions & 1 deletion scipy/platform/pom.xml
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Expand Up @@ -60,6 +60,12 @@
<version>${project.version}</version>
<classifier>${javacpp.platform.linux-x86_64}</classifier>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>${javacpp.moduleId}</artifactId>
<version>${project.version}</version>
<classifier>${javacpp.platform.macosx-arm64}</classifier>
</dependency>
<dependency>
<groupId>${project.groupId}</groupId>
<artifactId>${javacpp.moduleId}</artifactId>
Expand Down Expand Up @@ -90,7 +96,7 @@
<configuration>
<archive>
<manifestEntries>
<Class-Path>${javacpp.moduleId}.jar ${javacpp.moduleId}-linux-armhf.jar ${javacpp.moduleId}-linux-arm64.jar ${javacpp.moduleId}-linux-ppc64le.jar ${javacpp.moduleId}-linux-x86.jar ${javacpp.moduleId}-linux-x86_64.jar ${javacpp.moduleId}-macosx-x86_64.jar ${javacpp.moduleId}-windows-x86.jar ${javacpp.moduleId}-windows-x86_64.jar</Class-Path>
<Class-Path>${javacpp.moduleId}.jar ${javacpp.moduleId}-linux-armhf.jar ${javacpp.moduleId}-linux-arm64.jar ${javacpp.moduleId}-linux-ppc64le.jar ${javacpp.moduleId}-linux-x86.jar ${javacpp.moduleId}-linux-x86_64.jar ${javacpp.moduleId}-macosx-arm64.jar ${javacpp.moduleId}-macosx-x86_64.jar ${javacpp.moduleId}-windows-x86.jar ${javacpp.moduleId}-windows-x86_64.jar</Class-Path>
</manifestEntries>
</archive>
</configuration>
Expand Down Expand Up @@ -140,6 +146,7 @@
// requires static org.bytedeco.${javacpp.moduleId}.linux.ppc64le;
// requires static org.bytedeco.${javacpp.moduleId}.linux.x86;
requires static org.bytedeco.${javacpp.moduleId}.linux.x86_64;
requires static org.bytedeco.${javacpp.moduleId}.macosx.arm64;
requires static org.bytedeco.${javacpp.moduleId}.macosx.x86_64;
// requires static org.bytedeco.${javacpp.moduleId}.windows.x86;
requires static org.bytedeco.${javacpp.moduleId}.windows.x86_64;
Expand Down
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