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Hello,Is it possible to create a UI using rshiny for wdl pipeline, so that the user can set the JSON file parameters( input and output) via the rshiny UI and then, on click of a button trigger the run of the WDL pipeline? If so, can you share any examples or publications that have implemented this?
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Hi, we don't have such a usecase locally as we run biowdl pipelines using cromwell or miniwdl all through command line. But it is definitely possible to create a UI program (e.g., sitting on a node in a HPC cluster) so that the job submission can be triggered via this UI as you described. Other alternative approach could be creating a tool interface in Galaxy or leveraging what is already provided in cromwell server (similar to an old but obsolete attempt https://github.com/epam/wdl-workspace).
Hello,Is it possible to create a UI using rshiny for wdl pipeline, so that the user can set the JSON file parameters( input and output) via the rshiny UI and then, on click of a button trigger the run of the WDL pipeline? If so, can you share any examples or publications that have implemented this?
The text was updated successfully, but these errors were encountered: